KEGG   Sulfurihydrogenibium sp. YO3AOP1: SYO3AOP1_0984
Entry
SYO3AOP1_0984     CDS       T00715                                 
Name
(GenBank) ribonuclease, Rne/Rng family
  KO
K08301  ribonuclease G [EC:3.1.26.-]
Organism
sul  Sulfurihydrogenibium sp. YO3AOP1
Brite
KEGG Orthology (KO) [BR:sul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sul03019]
    SYO3AOP1_0984
   03009 Ribosome biogenesis [BR:sul03009]
    SYO3AOP1_0984
Messenger RNA biogenesis [BR:sul03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SYO3AOP1_0984
Ribosome biogenesis [BR:sul03009]
 Prokaryotic type
  rRNA processing factors
   SYO3AOP1_0984
SSDB
Motif
Pfam: RNase_E_G S1 RNase_E_G_Thio Zn_ribbon_2 CENP-T_C
Other DBs
NCBI-ProteinID: ACD66605
LinkDB
Position
1017929..1019341
AA seq 470 aa
MDRKLIVTKGFKNTFYLILEDNIPVELKIEDIEISKQTGSIYKGKVLRYSQAMEAFFVDI
GEDKEAFLPKKDICEEVCKNIDKGSSILVQVKRSPVSTKGAKLSCKISLPGKYLVLLPQS
KGKISISSKYEDNDERNEIKERIKNLLHEINQENFGLIIRTAAKDAPDEAILEDFKFLIE
LWNQIQKDYNKKKAPSVIYEEPFKAFAILRDYAGSFSEIISDDVSILKLIKKFVLENFTN
ANIKMTPYRKRKESLFYEYELDKLINKILSPYAYLKSGSYLVIQETEALVVIDVNSGSCH
KQKNLEETAFRINLEAIPEIVRQIRLRDLSGIVVIDFIDMINQEHKEAIVERLKEEFKKD
KRPVKIKGLTQLGLLELSRKKLEESLIKQLSDYCQHCYGRGYIKSQDVVIFELEKTINKL
KPFAKMKIIINPKLSKAVDNLLENLKLKELVEIEYNNKMQLDKFEVEKVL
NT seq 1413 nt   +upstreamnt  +downstreamnt
ttggatagaaagctaatcgtcactaaaggctttaaaaatacattttatcttattttagaa
gacaacatacccgttgaacttaagatagaagatattgagatatctaagcaaactggaagt
atttataaaggtaaggttttaagatatagtcaagcgatggaagctttttttgttgatatc
ggagaggataaagaagctttcctgccaaaaaaagatatttgcgaagaagtttgtaagaat
atagataaaggctcttcgatcttggtacaggtaaaaaggtctccggttagtacaaaagga
gcaaaactttcctgtaaaatttctcttccgggtaaatatttggtattacttccccaaagc
aaaggcaaaatttctatttcatcaaaatatgaagataatgatgaaaggaatgaaattaaa
gaaagaataaagaatctattgcatgaaataaatcaagaaaattttggattaatcattaga
accgctgcaaaggatgcaccggatgaagcaattttagaagattttaaatttctgatagaa
ttatggaaccaaatccaaaaagattataataagaaaaaagctccatctgtaatatatgaa
gaaccattcaaagcctttgcaattttaagagattatgcaggctcattttctgaaataatc
tcagatgatgtgtctattttaaagctgattaaaaagttcgtcttggaaaattttacaaat
gcaaacattaaaatgactccttacagaaaaagaaaagagtcgttattctatgaatatgag
ttagacaagctgataaataaaatcctatcgccatatgcatatctaaaaagtggttcctat
cttgtaattcaagaaacagaagcgttagtagttattgatgtaaacagcggaagctgtcat
aaacagaaaaatttagaagagacagcatttagaataaacttagaagcaattccagaaatt
gtcaggcagataagacttagagatttaagcggaatagttgtaatagattttattgatatg
ataaatcaagagcataaagaagcaattgtggaaagacttaaagaagaatttaaaaaagat
aaaagacctgtaaagattaaaggattaacacagcttggacttttagaactctcaagaaag
aagcttgaagaaagtcttataaaacagctttcagattactgtcagcattgttatggaaga
ggatatataaaatctcaagatgtagtgatatttgagcttgaaaagacaattaataaacta
aaaccatttgcaaaaatgaaaattattatcaatccaaagctttccaaagctgtagataat
ttattggaaaatttaaagctaaaagaacttgtagagatagagtataataataaaatgcag
ttagataaatttgaggttgaaaaagtattatga

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