Entry |
|
Name |
(GenBank) ribonuclease, Rne/Rng family
|
KO |
K08301 | ribonuclease G [EC:3.1.26.-] |
|
Organism |
sul Sulfurihydrogenibium sp. YO3AOP1
|
Brite |
KEGG Orthology (KO) [BR:sul00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:sul03019]
SYO3AOP1_0984
03009 Ribosome biogenesis [BR:sul03009]
SYO3AOP1_0984
Messenger RNA biogenesis [BR:sul03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SYO3AOP1_0984
Ribosome biogenesis [BR:sul03009]
Prokaryotic type
rRNA processing factors
SYO3AOP1_0984
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
1017929..1019341
|
AA seq |
470 aa
MDRKLIVTKGFKNTFYLILEDNIPVELKIEDIEISKQTGSIYKGKVLRYSQAMEAFFVDI
GEDKEAFLPKKDICEEVCKNIDKGSSILVQVKRSPVSTKGAKLSCKISLPGKYLVLLPQS
KGKISISSKYEDNDERNEIKERIKNLLHEINQENFGLIIRTAAKDAPDEAILEDFKFLIE
LWNQIQKDYNKKKAPSVIYEEPFKAFAILRDYAGSFSEIISDDVSILKLIKKFVLENFTN
ANIKMTPYRKRKESLFYEYELDKLINKILSPYAYLKSGSYLVIQETEALVVIDVNSGSCH
KQKNLEETAFRINLEAIPEIVRQIRLRDLSGIVVIDFIDMINQEHKEAIVERLKEEFKKD
KRPVKIKGLTQLGLLELSRKKLEESLIKQLSDYCQHCYGRGYIKSQDVVIFELEKTINKL
KPFAKMKIIINPKLSKAVDNLLENLKLKELVEIEYNNKMQLDKFEVEKVL |
NT seq |
1413 nt +upstreamnt +downstreamnt
ttggatagaaagctaatcgtcactaaaggctttaaaaatacattttatcttattttagaa
gacaacatacccgttgaacttaagatagaagatattgagatatctaagcaaactggaagt
atttataaaggtaaggttttaagatatagtcaagcgatggaagctttttttgttgatatc
ggagaggataaagaagctttcctgccaaaaaaagatatttgcgaagaagtttgtaagaat
atagataaaggctcttcgatcttggtacaggtaaaaaggtctccggttagtacaaaagga
gcaaaactttcctgtaaaatttctcttccgggtaaatatttggtattacttccccaaagc
aaaggcaaaatttctatttcatcaaaatatgaagataatgatgaaaggaatgaaattaaa
gaaagaataaagaatctattgcatgaaataaatcaagaaaattttggattaatcattaga
accgctgcaaaggatgcaccggatgaagcaattttagaagattttaaatttctgatagaa
ttatggaaccaaatccaaaaagattataataagaaaaaagctccatctgtaatatatgaa
gaaccattcaaagcctttgcaattttaagagattatgcaggctcattttctgaaataatc
tcagatgatgtgtctattttaaagctgattaaaaagttcgtcttggaaaattttacaaat
gcaaacattaaaatgactccttacagaaaaagaaaagagtcgttattctatgaatatgag
ttagacaagctgataaataaaatcctatcgccatatgcatatctaaaaagtggttcctat
cttgtaattcaagaaacagaagcgttagtagttattgatgtaaacagcggaagctgtcat
aaacagaaaaatttagaagagacagcatttagaataaacttagaagcaattccagaaatt
gtcaggcagataagacttagagatttaagcggaatagttgtaatagattttattgatatg
ataaatcaagagcataaagaagcaattgtggaaagacttaaagaagaatttaaaaaagat
aaaagacctgtaaagattaaaggattaacacagcttggacttttagaactctcaagaaag
aagcttgaagaaagtcttataaaacagctttcagattactgtcagcattgttatggaaga
ggatatataaaatctcaagatgtagtgatatttgagcttgaaaagacaattaataaacta
aaaccatttgcaaaaatgaaaattattatcaatccaaagctttccaaagctgtagataat
ttattggaaaatttaaagctaaaagaacttgtagagatagagtataataataaaatgcag
ttagataaatttgaggttgaaaaagtattatga |