Sulfurihydrogenibium sp. YO3AOP1: SYO3AOP1_1170
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Entry
SYO3AOP1_1170 CDS
T00715
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sul
Sulfurihydrogenibium sp. YO3AOP1
Brite
KEGG Orthology (KO) [BR:
sul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sul03032
]
SYO3AOP1_1170
03400 DNA repair and recombination proteins [BR:
sul03400
]
SYO3AOP1_1170
Enzymes [BR:
sul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SYO3AOP1_1170
DNA replication proteins [BR:
sul03032
]
Prokaryotic type
DNA Topoisomerases
SYO3AOP1_1170
DNA repair and recombination proteins [BR:
sul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SYO3AOP1_1170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
PCC_BT
PQQ_2
REST_helical
Motif
Other DBs
NCBI-ProteinID:
ACD66782
LinkDB
All DBs
Position
complement(1216051..1218432)
Genome browser
AA seq
793 aa
AA seq
DB search
MEDIKKVPIEEEVKSAYIDYAMSVIAGRAIPDVRDGLKPVQRRILYSMYELGLLPNKPYK
KSARVVGETLGKFHPHGDASVYDALVRMAQDFTMRYPLIEGQGNFGSIDGDPPAAMRYTE
ARLTKLAVEMLEDIDKNTVDMMPNFDASLEEPTVLPSKFPNLICNGTTGIAVGLATSIPP
HNFTEVAEALKYLAEFPDATIEELFNFIKGPDFPTGGVITNTKEELIDIYKSSRGSITIK
GKARIEKLPGNRQRIVIYEIPYQVNKVELIKKIAELVRTGKEKGISDLRDESDRTGIRIV
IELKRDADAEKVLKKLYKSTPLEKNFPVNLTVLVDKQPRVLNLKELLQEFIKHRIEIITR
RTLFELEKAENRLHIVEGLITALENADKVIEIVRSSKDTAQARQLLTSQFNLSETQANAI
LDMRLSRFTSLETQKLKDESIELKQKIERYKQILSSDNEKIKVFIEETDELVRKYGDQRK
TTIATEKELTFKEHFMFAILNTGRIVNYKVEDETSKADILQRIINSLSISLTEGEKIVSI
QEVEGSKPIAFFTKDGKAYWSLVIDLPKGEDKLNIEGEIVGTAYQGEGEENRVFLITKKG
IIKRMSDEDIFYKSQGHTVMPLNEGDELVVAVADRHPSYIGIYTKNADLLLFERNEVRIT
GDKAKGVEAIDLDENDEVAGAFFLNGHEYLLISTSFGYMKLVEKTEFPIKKRAQKGLLAV
KLNKDDYVVSILPVNKSDEVLINTKHGKLLKLKIDKETIPVEKRTSLGKNLFKFEADRIV
NVLKLPLFEESKE
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggaagatattaaaaaagttccgatagaagaggaagttaaaagtgcttatatagattat
gcaatgtcggttattgctggtagggccattccggatgttagagatggcttaaaaccagtt
caaagaagaattttatactctatgtatgagctgggtttacttccaaacaaaccatataaa
aagtctgcaagagttgtaggggaaacacttggtaaattccatccacatggtgatgcgtct
gtttatgatgcacttgtaagaatggcacaagattttacaatgagatatccgttaatagaa
ggtcaagggaactttggttcaatagacggcgacccgcctgctgcaatgcgttatacagaa
gcaaggttaacaaaattggctgttgaaatgcttgaagatatagataaaaacaccgttgat
atgatgcctaactttgatgcttcattagaagagcctacggtattaccttcaaaatttcca
aatttaatatgtaatggaacaacaggtattgcagtagggcttgctacaagcattccaccc
cataactttacagaagtggcagaagctttaaaatacttggcagaatttccggatgctacc
atagaagagctgtttaactttataaaaggaccggattttccaacaggtggagtaatcaca
aacaccaaagaagagctaattgatatatacaaatcatcaagaggttcaataacaataaaa
ggtaaagcaagaatagaaaagctgccggggaacagacaaaggatagttatctatgaaatt
ccataccaagttaacaaagttgaacttatcaaaaaaatagcggagcttgttagaacagga
aaagaaaaaggaatatcagacctaagagatgaatcagacagaacaggaattagaattgta
atagagttaaaaagagatgcagacgctgaaaaagtcttgaagaaactatacaaaagcacg
cctcttgaaaagaactttcctgtaaatttaacagtgttagtagataaacagccaagagta
ttgaatttaaaagaattgcttcaagaatttataaaacacagaatagaaattataacaaga
aggacgttatttgaattagaaaaagcagaaaacagactacatattgtagaagggctgatt
acagccttagaaaatgcagataaagttattgaaatagttcgttcatccaaggatacagca
caagcaagacagctgcttacatcacaatttaacctatctgaaacacaggcaaacgctatt
cttgacatgagattatcaagatttacatccttagaaactcaaaaattaaaagatgaaagc
atagagttaaaacaaaaaatagaaagatataaacaaattctttcaagcgataatgagaaa
atcaaagtattcatcgaagagactgatgagttagttagaaaatatggagaccaaagaaaa
acaaccatcgcaacagaaaaagagcttacatttaaagaacatttcatgtttgccatttta
aatacaggaagaattgttaattataaagtagaagatgaaacttcaaaagctgacatttta
caaagaattatcaatagcctgtcaatatctttaacggaaggagaaaagatagtctctatt
caagaagtagaagggtctaaaccgattgctttctttacaaaagatggaaaagcttattgg
agcttagttatagaccttccaaagggcgaagataagctaaatattgaaggtgaaatcgtt
ggaacagcttatcaaggagagggtgaagaaaacagagtatttttaataacaaagaaaggt
attatcaaaagaatgtctgatgaagatatattctataagtcacaaggacacacggtaatg
ccgttaaacgaaggtgatgagcttgtagtggcagttgcagatagacatccttcctacatt
ggaatttacacaaaaaatgcagatttactcttatttgaaagaaatgaagtaagaattaca
ggagataaggcaaaaggcgtagaagctattgatttagatgaaaatgatgaagtagccgga
gcatttttcttaaatggtcatgaatatctactcatatctacttcttttggttatatgaag
cttgtagaaaaaacagagtttccaatcaagaaaagagcacaaaaaggtcttttggcagta
aaattaaacaaagacgattatgtagtctcaatattacctgttaataaatctgatgaagtg
ttgattaatacaaaacatggcaaactcttaaagttaaaaattgataaagaaacaatacct
gttgaaaagagaacatccttgggtaaaaatttatttaaatttgaagccgatagaattgtg
aatgtgttaaaacttccactttttgaagaaagcaaagaatga
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