Sulfurihydrogenibium sp. YO3AOP1: SYO3AOP1_1511
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Entry
SYO3AOP1_1511 CDS
T00715
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sul
Sulfurihydrogenibium sp. YO3AOP1
Brite
KEGG Orthology (KO) [BR:
sul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sul03016
]
SYO3AOP1_1511
Enzymes [BR:
sul01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SYO3AOP1_1511
Transfer RNA biogenesis [BR:
sul03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SYO3AOP1_1511
Prokaryotic type
SYO3AOP1_1511
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PseudoU_synth_2
DUF7614
PSA_CBD
UPF0113
Motif
Other DBs
NCBI-ProteinID:
ACD67113
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All DBs
Position
1554682..1555533
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AA seq
283 aa
AA seq
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MDGILLVNKPKFITSNDLVIKIKKHLNEKMGHTGTLDYAASGLMVLTVGQGTKITQYLQK
LDKQYIAEGKLGEITDTYDSQGKIIQTKPVEIDEEKLKEIIFSFVGEYYQTPPPYSSKRI
GGTRAYKLAKKGVEVQLKPVLIKIYGIEILEINLPYFKIKVDCSSGTYIRSLIKDIGDKA
DCGAYMTDLVRTKIGQFDLKDALSFEEILKKNPNEIKLISLKDALYFLPEIKLNQDYEKR
FKHGQKIKVDCIESKDIKVLNENHELIGIGEIKDCILKPKIVL
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggatggaatacttttagtaaataaaccaaagtttataacttcaaacgatttggtgata
aagataaagaaacatcttaatgaaaaaatgggtcacacaggcacacttgattatgcagca
tcgggcttgatggttttaacagtagggcaagggacaaaaataactcagtatttacaaaaa
cttgataagcagtacatagcagagggaaaacttggagaaattacagacacatacgatagc
caaggcaaaattatacaaacaaaacctgttgagattgatgaagaaaagttaaaagagata
attttttcttttgtaggagaatactatcagacaccgccgccgtattcgtcaaaaaggata
ggtggaacaagggcttataaacttgcaaaaaaaggagtagaagttcagctaaaacctgta
ttaataaaaatatacggcatagaaatcttagagataaatctaccatactttaaaataaaa
gttgactgttcttcaggtacttatattagaagcttgataaaggatattggagacaaagca
gactgcggagcttacatgacagatttagttagaactaaaataggacagtttgatttaaaa
gatgctttatcttttgaagaaatattaaagaaaaatccaaacgagataaagctaatcagc
ctaaaagatgcgttatacttcttaccggaaattaaactaaatcaagattatgaaaaaaga
tttaaacatggacaaaaaataaaagttgactgtatagaatcaaaagatataaaggtttta
aatgaaaaccacgagctgataggaataggagagataaaagactgtattttaaagccaaaa
atagttttgtaa
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