Sulfurihydrogenibium sp. YO3AOP1: SYO3AOP1_1544
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Entry
SYO3AOP1_1544 CDS
T00715
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sul
Sulfurihydrogenibium sp. YO3AOP1
Pathway
sul03030
DNA replication
sul03430
Mismatch repair
sul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SYO3AOP1_1544
03430 Mismatch repair
SYO3AOP1_1544
03440 Homologous recombination
SYO3AOP1_1544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sul03032
]
SYO3AOP1_1544
03400 DNA repair and recombination proteins [BR:
sul03400
]
SYO3AOP1_1544
Enzymes [BR:
sul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SYO3AOP1_1544
DNA replication proteins [BR:
sul03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SYO3AOP1_1544
DNA repair and recombination proteins [BR:
sul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SYO3AOP1_1544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ACD67142
LinkDB
All DBs
Position
1588074..1588685
Genome browser
AA seq
203 aa
AA seq
DB search
MNSILERLSFYYKKKRLKNPKYSFLFEEPPENEYVAFDTETTGLNPKVDDILSIAAVKIK
DNKILLNERFNVIVKPDREINEDVIKIHGLRKKDLESGIPIEEAVDRFVHFIGSRPLVGY
YLEFDVAMINKYFKKLSGTTLPNKQIEVSALYYDYKIGLIPQGFVDLRFDSILKDLDIPT
FGKHDALNDAIMTALIFLKLKNK
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcatattagaaagattaagtttttactataagaaaaaacgattaaaaaatcca
aaatacagctttctgtttgaagagccaccggaaaatgagtatgtagcatttgatacagaa
actacaggtttaaatccaaaagttgatgatattttgtcaatcgcagcagtaaagataaaa
gataataaaatactattaaatgaaaggtttaacgtaattgttaaaccggatagagagatt
aacgaagatgtcattaaaattcacggacttagaaaaaaagaccttgaatccggtatacca
atagaagaagcagttgatagatttgtacattttataggaagcagaccacttgtaggttat
tacttagagtttgacgttgcaatgataaacaaatattttaaaaaactctccggaacaaca
ttgccaaacaaacagatagaagtatcagcactttattacgattacaaaatcggcttaatt
ccacagggatttgttgatttaagatttgattctatcctcaaagatttagacatacctacc
tttggaaaacatgatgctttaaacgatgccatcatgacagcactgatttttttaaagtta
aaaaataaataa
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