Sulfurihydrogenibium sp. YO3AOP1: SYO3AOP1_1609
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Entry
SYO3AOP1_1609 CDS
T00715
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
sul
Sulfurihydrogenibium sp. YO3AOP1
Pathway
sul03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SYO3AOP1_1609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sul03400
]
SYO3AOP1_1609
Enzymes [BR:
sul01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
SYO3AOP1_1609
DNA repair and recombination proteins [BR:
sul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SYO3AOP1_1609
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos2
Motif
Other DBs
NCBI-ProteinID:
ACD67207
LinkDB
All DBs
Position
complement(1667247..1668041)
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AA seq
264 aa
AA seq
DB search
MKICTFNVNSIKARKDLVIEWLNHRNNDIDVLCFQEIKVEDKNFPSEDFKKLGYVYQDIS
GQKGYNGVATLSKLEISHYQKGLNHEYFDVQKRVLIDKIIEKEIFVINTYAPHGDLRGGE
KYYYKLDWYKHFINFLKENFDFENQKIMLLGDLNIALEDIDVYDPVLLTDSIGTMPEERE
LLRQLLNLGLIDTFRYLYPNKQQFTWWDYIGGAIWRNEGMRIDYILVSKPFLQYVKNVEV
DLWPRRRRSPKPSDHAPVILDLEI
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttgtacgtttaatgttaattctataaaagcacgaaaagatttggttattgaa
tggttaaatcatagaaacaacgatatagatgttttatgttttcaagagattaaggtagaa
gataaaaactttccttctgaagattttaaaaagcttggttatgtatatcaagatatttct
ggacaaaaaggatataacggagttgctactttatctaagcttgaaatttctcattatcaa
aaaggtttaaatcacgaatactttgatgttcaaaaaagggttttaattgataaaatcata
gaaaaggaaatttttgtgattaacacatatgctccacatggagatttgagaggtggagag
aaatattattacaaattggattggtataagcattttattaactttctaaaggaaaatttt
gattttgaaaatcaaaagataatgttacttggagacttgaatattgcattagaagatata
gatgtttacgaccctgtactactgacagattcaatcggaaccatgccggaagaacgagaa
cttttaagacagcttttaaatcttggcttgatagatacatttagatacttatatccaaac
aagcaacaatttacatggtgggattatataggtggtgctatttggagaaatgaaggaatg
agaatagattacatattagtatcaaaaccgtttttgcagtatgtaaaaaatgttgaagtt
gatttgtggccaagaagaagaaggtcgccaaaaccttctgaccatgctcctgtaatctta
gatcttgaaatataa
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