Sulfurihydrogenibium sp. YO3AOP1: SYO3AOP1_1696
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Entry
SYO3AOP1_1696 CDS
T00715
Name
(GenBank) RNA-binding S4 domain protein
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
sul
Sulfurihydrogenibium sp. YO3AOP1
Brite
KEGG Orthology (KO) [BR:
sul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sul03009
]
SYO3AOP1_1696
Enzymes [BR:
sul01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
SYO3AOP1_1696
Ribosome biogenesis [BR:
sul03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SYO3AOP1_1696
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
ACD67294
LinkDB
All DBs
Position
1755934..1756668
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AA seq
244 aa
AA seq
DB search
MRLDKFLSNQGFGSRSQVQKLIKKGFVKVNDEIVKDPSYHIDPMKDKVELEDEEILYKEN
HYFMLNKPAGYITATEDEEYPTVLDLFSDLPIASKLFPVGRLDIDTEGLLILTTDGQFGH
RLSHPKWNIEKEYYAIVEGDISNIDFSESENKGIYLKKEKYQTKPFKVKVLNTSKDKSEI
LITLTEGKYHIVKRIMQELGYPVLYLKRIRIGNLKLDEDLLPGEFRELTEKEIKDLKKLI
KMND
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
attagattagacaaatttttatcaaatcaaggatttggtagtagaagtcaagttcaaaag
cttataaaaaaaggttttgtcaaagtaaatgatgagattgtaaaagacccatcttatcat
atagacccaatgaaagataaagtcgagcttgaagatgaagagatattgtataaagaaaat
cattattttatgttaaataaacctgccggttacatcacagcaacagaagatgaagaatat
ccaacagttctagatttattctcagatttaccgatagcttctaagctctttccggtagga
aggcttgatatagatacagaaggacttttaattctaacaacagatggacaatttggacac
aggctttctcacccaaaatggaatatagaaaaagaatactatgcaatcgttgaaggagac
atttctaacattgatttttctgagtctgaaaataaaggaatatatctaaaaaaagaaaaa
tatcaaacgaaaccatttaaagtaaaagtcttaaacacttcaaaagataaatcagagatt
ttaatcacacttacagaaggcaagtatcatattgttaaaagaattatgcaggagcttgga
tatcctgtattatatttaaaaagaattagaataggcaatctaaaacttgatgaagatttg
ctgcccggcgaatttagagagcttacggaaaaagaaataaaagatctaaaaaaacttata
aagatgaatgattaa
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