Sulfurihydrogenibium sp. YO3AOP1: SYO3AOP1_1712
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Entry
SYO3AOP1_1712 CDS
T00715
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sul
Sulfurihydrogenibium sp. YO3AOP1
Brite
KEGG Orthology (KO) [BR:
sul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sul03016
]
SYO3AOP1_1712
Enzymes [BR:
sul01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SYO3AOP1_1712
Transfer RNA biogenesis [BR:
sul03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SYO3AOP1_1712
Prokaryotic type
SYO3AOP1_1712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ACD67310
LinkDB
All DBs
Position
complement(1771940..1772671)
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AA seq
243 aa
AA seq
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MEIKNYKLEISYIGTNYNGWQRQKNGIGIQQVIEDLLSELLEEKITLIGAGRTDAGVHAL
RQVANFKTKKHKNTKTIYTYLNAKLPRDISILKVEEVPLSFNARFSAKGKTYLYKINTKP
DPFLFKLAWYYDKKLDLIKMVEGINLIKQYKDLSSLAKAGDYIRKEIDLRELKLYFDGKI
ITIEITASHFLRNMVRRIAGHLVALGRGSLSLEELKDIIEKKSPSHGKFTAPPEGLYLKA
VYY
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggagataaaaaactacaagcttgaaatcagttatattggaactaactacaacggttgg
caaaggcagaaaaacggaattggaattcagcaagtcattgaagatttattatctgagctt
ttggaagaaaaaataacgctgattggtgcaggaaggactgatgcaggcgttcatgcttta
aggcaggttgcaaactttaaaacgaaaaaacataaaaacacaaagaccatatatacctat
cttaatgcaaaactgccaagagatatttcaattttgaaagttgaagaagtgccactttct
tttaatgcaagattttcagccaaaggaaagacatacctttataagataaacacaaagcca
gacccatttttgtttaaacttgcttggtattatgataaaaaattagacttgataaagatg
gtagaaggaattaatttaataaagcagtataaagacctttcttctttggcaaaagcaggg
gattatataagaaaagaaatcgatttaagagagcttaagttatactttgatggtaaaatc
ataaccatagaaattacagcatctcactttttaagaaatatggtccgtagaattgcagga
caccttgtcgcacttggaagaggtagcttaagcttagaagagttaaaagatataatagaa
aagaaaagtccatcccatggtaaatttacagcaccaccggaaggtttatatttaaaagca
gtgtattattag
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