KEGG   Saccharolobus sp. A20: BFU36_02390
Entry
BFU36_02390       CDS       T04516                                 
Name
(GenBank) RNA-binding protein
  KO
K03679  exosome complex component RRP4
Organism
sula  Saccharolobus sp. A20
Pathway
sula03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sula00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BFU36_02390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sula03019]
    BFU36_02390
Messenger RNA biogenesis [BR:sula03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     BFU36_02390
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     BFU36_02390
SSDB
Motif
Pfam: ECR1_N_2 RRP4_S1 S1 RRP40_S1 KH_6 KH_1
Other DBs
NCBI-ProteinID: AOL15762
UniProt: A0A1C8ZQV5
LinkDB
Position
454943..455683
AA seq 246 aa
MSQQKILLQPRSIVVPGELIAEGDFQIPWSPYVLKIGNKYYSTIVGLFDVKDSQFEIIPL
EGSYYYPKVGDIVIGLIDDIEIYGWIVDIKAPYHAYLPASNLLGRPVTPGEDLRKYLDIG
DYVIAKVENYDRTIDPVLSVKGKDLGRVTSGIVVDIMPVKVPRVIGKNRSMYETLTLESG
CSMLVANNGRILANCPSQLAEKVLIEAIRKIESESHIKGLTDRIKKFIQEKLGEKGASNS
ETTINS
NT seq 741 nt   +upstreamnt  +downstreamnt
atgagccaacaaaaaattttgttacaacctcgatcaatagtagttcccggcgaattaata
gctgaaggagattttcagattccatggagtccatatgtcttgaaaattggcaataagtac
tattcaacaatagtaggattatttgatgttaaagattcgcaatttgaaataatacccttg
gaagggtcgtattattatcctaaagtaggggatattgtaatcggtttaatagatgatata
gagatatatggatggatcgttgacattaaagccccatatcatgcctacttgcccgcatct
aatttgctgggtagacctgttacgccgggtgaagatttaaggaaatatctagatattgga
gattatgtaatagctaaagtcgaaaactacgatagaactattgatccagttctttcagtt
aagggaaaggatttaggcagagtaacctcaggaattgtagttgatattatgccggtaaaa
gtacctcgtgtaataggtaaaaataggagtatgtatgaaacattaacgttagaaagtgga
tgtagtatgttagtagctaataatgggaggatcttagctaattgtccttcccagctagct
gaaaaagttctaattgaggctatacgaaagattgaaagtgagtcacatataaaaggatta
actgatagaattaagaaattcatacaagaaaaactgggtgaaaaaggtgcttcaaattca
gaaaccacgattaattcttga

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