Saccharolobus sp. A20: BFU36_02390
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Entry
BFU36_02390 CDS
T04516
Name
(GenBank) RNA-binding protein
KO
K03679
exosome complex component RRP4
Organism
sula
Saccharolobus sp. A20
Pathway
sula03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sula00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BFU36_02390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sula03019
]
BFU36_02390
Messenger RNA biogenesis [BR:
sula03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
BFU36_02390
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
BFU36_02390
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N_2
RRP4_S1
S1
RRP40_S1
KH_6
KH_1
Motif
Other DBs
NCBI-ProteinID:
AOL15762
UniProt:
A0A1C8ZQV5
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Position
454943..455683
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AA seq
246 aa
AA seq
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MSQQKILLQPRSIVVPGELIAEGDFQIPWSPYVLKIGNKYYSTIVGLFDVKDSQFEIIPL
EGSYYYPKVGDIVIGLIDDIEIYGWIVDIKAPYHAYLPASNLLGRPVTPGEDLRKYLDIG
DYVIAKVENYDRTIDPVLSVKGKDLGRVTSGIVVDIMPVKVPRVIGKNRSMYETLTLESG
CSMLVANNGRILANCPSQLAEKVLIEAIRKIESESHIKGLTDRIKKFIQEKLGEKGASNS
ETTINS
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacaaaaaattttgttacaacctcgatcaatagtagttcccggcgaattaata
gctgaaggagattttcagattccatggagtccatatgtcttgaaaattggcaataagtac
tattcaacaatagtaggattatttgatgttaaagattcgcaatttgaaataatacccttg
gaagggtcgtattattatcctaaagtaggggatattgtaatcggtttaatagatgatata
gagatatatggatggatcgttgacattaaagccccatatcatgcctacttgcccgcatct
aatttgctgggtagacctgttacgccgggtgaagatttaaggaaatatctagatattgga
gattatgtaatagctaaagtcgaaaactacgatagaactattgatccagttctttcagtt
aagggaaaggatttaggcagagtaacctcaggaattgtagttgatattatgccggtaaaa
gtacctcgtgtaataggtaaaaataggagtatgtatgaaacattaacgttagaaagtgga
tgtagtatgttagtagctaataatgggaggatcttagctaattgtccttcccagctagct
gaaaaagttctaattgaggctatacgaaagattgaaagtgagtcacatataaaaggatta
actgatagaattaagaaattcatacaagaaaaactgggtgaaaaaggtgcttcaaattca
gaaaccacgattaattcttga
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