Sulfitobacter sp. CB2047: IV89_000908
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Entry
IV89_000908 CDS
T10375
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sulb Sulfitobacter sp. CB2047
Pathway
sulb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sulb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IV89_000908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sulb03021
]
IV89_000908
03400 DNA repair and recombination proteins [BR:
sulb03400
]
IV89_000908
Enzymes [BR:
sulb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IV89_000908
Transcription machinery [BR:
sulb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IV89_000908
DNA repair and recombination proteins [BR:
sulb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IV89_000908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Glyco_hydro_65C
Motif
Other DBs
NCBI-ProteinID:
ULO20966
LinkDB
All DBs
Position
942731..943747
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPQQLDVKPGNDPARQATVIAEPLERGFGLTMGNALRRVLMSSLQGAAIT
SVQIDNVLHEFSSVAGVREDVTDIVLNLKGVSLRMEVEGPKRLSISAKGPGVVTAGDISE
SAGIEILNRDHVICHLDDNADVYMELTVNTGKGYVAADKNKPEDAPIGLIPIDAIYSPVK
KVSYDVQPTREGQVLDYDKLTMKVETDGSISPDDAVAFAARILQDQLGIFVNFDEPESAS
RQDDDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPDNIEDLAKKFEDSF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaaaaattgggctgaattgatcaagccacagcagttggacgtcaagccgggt
aatgaccctgcacgtcaggctactgtcatcgccgagccgctcgagcgtggctttggtttg
acaatgggcaacgcgctgcgccgcgttctgatgtcgtcgctgcaaggtgccgccatcaca
tctgtacaaattgataatgttttgcacgaattttcgagcgttgcgggtgttcgcgaagat
gtcaccgacatcgttctgaacctcaaaggcgtttccctgcgcatggaagtcgaagggccc
aagcgcctgtcgatctctgccaaggggccgggtgttgtcacagctggtgacatctccgaa
agcgctggtatcgaaattctgaaccgcgatcacgtgatctgccacctggatgacaatgct
gacgtttacatggaactgacggtcaacaccggtaagggctatgtggcggcagacaagaac
aagccagaagatgcgcctatcggtcttatcccgatcgacgcgatctattcgccggtcaag
aaagtgtcctatgacgtgcagccgacccgcgaaggtcaggtgctggattatgataagctg
acgatgaaagtcgaaacagacggctccatctctcctgacgatgccgtggcttttgctgcg
cgtattctgcaggatcagctgggtatcttcgtcaacttcgacgagcctgaatccgcatcg
cgtcaggacgacgacgacggtctggaattcaacccgctgctgctgaagaaagtagacgag
ctggaactgtccgtccgttcggcaaactgcctgaagaacgacaacatcgtctacatcggc
gatctgatccagaagaccgaagccgaaatgctgcgcacgccgaactttggccgcaagtcc
ttgaacgagatcaaggaagtgctgtcgggcatgggcctgcaccttggtatggacgtcgag
gactggccaccagacaacatcgaagacctcgcgaaaaagttcgaggattcgttctaa
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