Sulfitobacter sp. CB2047: IV89_002618
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Entry
IV89_002618 CDS
T10375
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sulb Sulfitobacter sp. CB2047
Brite
KEGG Orthology (KO) [BR:
sulb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sulb03032
]
IV89_002618
03400 DNA repair and recombination proteins [BR:
sulb03400
]
IV89_002618
Enzymes [BR:
sulb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
IV89_002618
DNA replication proteins [BR:
sulb03032
]
Prokaryotic type
DNA Topoisomerases
IV89_002618
DNA repair and recombination proteins [BR:
sulb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IV89_002618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
SnAC
Motif
Other DBs
NCBI-ProteinID:
ULO19573
LinkDB
All DBs
Position
complement(2659927..2660892)
Genome browser
AA seq
321 aa
AA seq
DB search
MSGAGLTYYGDDRPGISRQRRGRGFTYKAPDGTTIARGEERARLEAMAVPPAYEDVWMTP
LANGHLLATGRDTRNRKQYRYHEKWSEAQAETKFASLVDFAHALPRLRRFVARDLDQQAG
ERSFALASAVTLIDRASLRVGNPDYTRENGSYGTLTLRSRHVKLDGNVIRLRYTAKGGKK
VRRQINDRTLAKTLEKINDLPGAELLTWADAQGEVHQLNSAGLNAYIAEASGCDDFTAKT
FRTWAGTVAAFEAAEKGQATIKQLAEAAAAQLSNTPTVARNSYIHPAVIDLAGEAPPEIK
VGRKTGLFASEARLLTYLEQL
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgcggggctgacctattatggcgatgaccgccccggaatttcgcgtcagcgg
cgcgggcgcgggtttacctataaggcaccggacggcacaactattgctcgcggagaagag
cgcgcgcggctggaagcgatggcggtgccgcccgcctatgaagacgtgtggatgacgcct
ttggcgaacgggcatttgctggccacggggcgcgacacccgcaatcgcaaacaatatcgc
tatcacgaaaaatggtcagaggcgcaggcagagacgaaattcgcgagcctggtggatttt
gcgcatgctttgccgcgtctgcgccgctttgtcgctcgcgatctggatcagcaggcgggg
gagcgcagctttgccttggccagcgccgtcacgctgatcgaccgcgcgtcgctgcgggtg
ggaaatccggactacacgcgcgagaatggcagctatggcacgctgaccctgcggtcgcgc
catgtcaaactcgacgggaatgtgatccggctgcgttatacggccaagggcggcaagaag
gtgcggcggcagatcaacgaccggacgctggccaaaacgctggagaaaattaacgacctg
ccgggggcggagctgctgacatgggccgatgcgcagggcgaggtgcatcagttgaactca
gccggattgaacgcctatatcgccgaagcatcggggtgcgacgactttaccgccaagacc
ttccgtacatgggcgggcaccgttgccgccttcgaggccgccgagaaggggcaggccacc
atcaagcaattggccgaagccgccgccgcacagctgagcaatacgccgaccgtggcgcgc
aacagctatatccatccggcggtgatcgatctggcgggcgaagccccgcccgagatcaag
gtcgggcgcaagaccgggctattcgcctcggaagcgcggctgctgacgtatctggagcag
ctctga
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