Sulfitobacter sp. CB2047: IV89_002784
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Entry
IV89_002784 CDS
T10375
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sulb Sulfitobacter sp. CB2047
Brite
KEGG Orthology (KO) [BR:
sulb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sulb03032
]
IV89_002784 (topA)
03400 DNA repair and recombination proteins [BR:
sulb03400
]
IV89_002784 (topA)
Enzymes [BR:
sulb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
IV89_002784 (topA)
DNA replication proteins [BR:
sulb03032
]
Prokaryotic type
DNA Topoisomerases
IV89_002784 (topA)
DNA repair and recombination proteins [BR:
sulb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IV89_002784 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
HC2
Extensin_1
Motif
Other DBs
NCBI-ProteinID:
ULO19726
LinkDB
All DBs
Position
2831307..2834003
Genome browser
AA seq
898 aa
AA seq
DB search
MPVVVVESPAKAKTINSYLGSDYTVLASYGHVRDLPPKDGSVDPENGFDMTWEVAAASKK
HVKAIADALKDDNALILATDPDREGEAISWHLQEALTKRKSIKKDTPVSRVVFNQITKKA
VTEAMANPRQVDMPLVEAYLARRALDYLVGFNLSPVLWRKLPGAKSAGRVQSVTLRLIVE
REMEIEAFRNREYWSVKALVATPRGQEFEARLVTLAGKKLDRFDLGNETQAEMAVQAITS
RDLTVTSVEAKPASRNPSAPFMTSTLQQEASRKFGMGARQTMSTAQRLYEAGHITYMRTD
GIDMAPEAITMARDAISDRFGAEYVPSEPRIYKNKAKNAQEAHECVRPTDMTKDADALKL
TEPDQRKLYDLIWKRTLACQMESARLERTTVEIGSKDEQVGLRATGQVVKFDGFLRVYEE
GRDDVVDEDDKRLPQITQGDKMDKRAVTPEQHFTQPPPRYTEATLVKRMEELGIGRPSTY
ASVVTTIQDREYVRKEGNRLFPEDKGRLVTAFLENYFRKYVGYDFTADLENQLDKVSAAD
ADYKDVLGRFWQDFSAAIAETADLRITEVLEKINEVLEPHLFPPNEDGSDPRLCPNCEIG
RLSMRTARSGGAFIGCSNYPECRYTRPFGPPDPEAEASAIPPDGKLLGEDMGDEIRVFKG
RFGPYVQRGPVTEENKKPPRQSVPKDWPAEELELERAVMLLSLPREIGPHPEDGVMVWAN
IGRYGPYIKHADSTSNRGGTNANLETLDEVFTVGMNRAVQLLAEKVASRGGRGKAAKPIR
EMGEHPDLGGEVNIMEGKYGPYVKWEKVNATIPKEVEPADLTMERAVELIEEKLAKSPAK
RKAATKKPAAKKTAAKKAPAKKTAAKKAPAKKPAAQKAPAKKPTAKKAPAKSAAAPEE
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgccagttgtcgtcgtcgaatcacctgccaaagctaaaacgatcaactcgtatctcggc
agtgattacaccgtgcttgcgtcctacggccacgtccgcgatctgccgcccaaagacgga
tcggtcgacccggaaaacgggttcgacatgacttgggaagtcgccgcagcaagcaagaaa
cacgtcaaagccatcgctgatgcgctgaaagacgacaacgcattgatcctcgcgactgac
cctgatcgcgaaggcgaagcgatcagctggcacctgcaagaggcgctgaccaaacgcaag
tcgatcaagaaggacacaccggtcagccgcgtggtgttcaaccagatcaccaaaaaggcc
gtgaccgaggcgatggcgaacccgcgtcaggtcgatatgccactggtcgaggcctatctg
gcacggcgcgcgctggattatctggtgggcttcaacctgtcgcccgtcctatggcgcaaa
ttgcccggcgcgaaatcggcggggcgggtacagtcggtcaccttgcggctgatcgtcgag
cgcgagatggagatcgaggccttccgcaaccgcgaatactggagcgtcaaggcactggtc
gccaccccgcgcgggcaagagttcgaggcccgtctggtgacgcttgccggtaagaagctg
gaccgttttgatcttggcaatgaaacgcaagccgagatggcggtgcaggcgatcaccagc
cgtgatctgacggttaccagcgtcgaagcgaaacccgcgagccgcaacccctcggccccg
ttcatgacctcgaccctgcagcaggaagccagccgcaagttcggcatgggcgcacgccag
accatgagcacagcgcagcggctctatgaagccggtcacatcacctatatgcggaccgac
ggcatcgacatggcccccgaagcgatcacgatggcacgggacgctatctcggaccggttc
ggggcggagtatgtcccgtccgagccgcgcatttacaagaacaaggccaagaacgcgcaa
gaggcgcacgaatgtgtgcgccccaccgacatgaccaaagatgccgacgcgctgaaactg
accgaaccggatcaacgcaagctgtacgacctgatctggaagcgcacgctggcctgccag
atggaaagtgcgcgtctggaacgcaccacggtagagatcggcagcaaggacgaacaggtc
gggctgcgcgccaccggccaggtggtgaaattcgacggcttcctgcgtgtctacgaagaa
ggccgcgacgatgtcgtggacgaggatgacaagcgcctgccgcagatcacccaaggcgac
aagatggacaaacgcgccgtcacgccagagcagcactttacccagccgcccccccgctac
accgaagcgacattggtcaagcgcatggaagagctgggaatcgggcgcccgtcgacctac
gccagcgttgtcaccaccattcaggaccgcgaatacgttcgcaaggaaggcaaccgtctg
ttccccgaggacaagggccgtttggtgacggccttcctcgagaattacttccgcaaatat
gtgggctatgacttcaccgccgatctggaaaaccagcttgataaggtgagcgcggcggat
gccgactataaggatgtgctgggccggttctggcaggatttctcggctgcgattgccgaa
acagccgatttgcgcatcaccgaggtgttggagaagatcaacgaggtactcgagccgcat
ctcttcccgcccaatgaggatggtagcgacccgcgcctgtgccccaactgcgagatcggg
cgtttgtccatgcgcaccgcacggtccggcggcgcgttcatcggctgttcgaactaccct
gaatgccgctatacccgccccttcggcccgcccgaccccgaggcagaagcctcggctatt
ccgcccgatggcaaactgctgggcgaggatatgggcgacgagatccgcgtgttcaaaggg
cgcttcggcccttatgtgcagcgcggccccgtcaccgaagagaacaaaaaaccgccgcgt
caatcggtgcccaaggactggcccgccgaagagctggagctggaacgcgctgtcatgctg
ctgtcgttgccgcgagagatcggcccgcacccggaagatggggtgatggtctgggcaaat
atcgggcgctacggcccctatatcaaacacgccgacagcacgtcgaaccgtggcgggacc
aatgcgaacctcgaaacactggacgaggtgttcaccgttggcatgaaccgcgccgtgcaa
ttgctggccgagaaagtcgccagccgtggcgggcgtggcaaagcggcaaaaccgatccgc
gagatgggcgaacaccctgatctgggcggcgaggttaacatcatggaaggcaaatacggg
ccttatgtgaagtgggagaaagtcaacgccaccatccccaaagaggtcgagcctgccgat
ctgaccatggaacgtgcggttgagctgattgaggaaaagctggcgaagtcccctgccaag
cgcaaagccgcaaccaagaagcccgcagcaaagaaaaccgctgcgaaaaaggctccggcc
aagaaaacggctgccaagaaggcccccgcaaagaaaccagcggcccaaaaggcacccgca
aagaaaccaacggccaaaaaggcacccgcaaaatcggccgccgcaccggaagaatga
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