Sulfitobacter sp. CB2047: IV89_003083
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Entry
IV89_003083 CDS
T10375
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
sulb Sulfitobacter sp. CB2047
Pathway
sulb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sulb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IV89_003083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sulb03019
]
IV89_003083
Messenger RNA biogenesis [BR:
sulb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
IV89_003083
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
dCMP_cyt_deam_1
Motif
Other DBs
NCBI-ProteinID:
ULO20014
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All DBs
Position
complement(3128526..3129017)
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AA seq
163 aa
AA seq
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MTPEEIARLPYRPCVGVMLVNADGHVFVGQRRDRDQDAWQMPQGGVEKGEHAEVAALREL
EEETGIPPSSVTVVAQTEGWLPYDLPIELVPNIWKGRFRGQEQKWFLLRFHGSDDEINLD
TEHPEFSDWRWLPVRELVDNIVPFKREVYTAVVNAFVEHFADA
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atgacgccagaagaaatcgcccgactgccctatcgcccctgtgtcggggtcatgctggtc
aacgccgacgggcatgtgtttgtcgggcaacgtcgggaccgggatcaggacgcatggcag
atgccgcaaggtggcgtcgaaaagggcgaacacgccgaagtcgccgccctgcgcgaactg
gaggaagagacaggcatcccgccaagttctgtcacggtggtggcacagaccgagggctgg
ttgccctatgacctgccgatcgaactggtgcccaacatctggaaaggccggttccgcggg
caagagcagaaatggttcctgctgcgctttcacgggtcggatgacgagatcaacctggac
accgaacaccccgaattctcggactggcgctggttgccggtgcgcgaactggtcgacaac
atcgtcccgttcaagcgtgaggtctataccgctgtggtcaacgcctttgtcgagcatttc
gccgacgcctga
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