Sulfurimonas sp. CVO: CVO_01100
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Entry
CVO_01100 CDS
T06373
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
sulc
Sulfurimonas sp. CVO
Pathway
sulc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sulc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CVO_01100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sulc03400
]
CVO_01100
Enzymes [BR:
sulc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
CVO_01100
DNA repair and recombination proteins [BR:
sulc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CVO_01100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QHG90518
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Position
210769..211617
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AA seq
282 aa
AA seq
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MSNKFVGAHVSASGGVFNAVENAVEIGAKAFALFTKNQRQWSAKPLDNETIDKFKKALQE
SGILPRHVLPHDSYLINIGHPEADKREKSMDAFLDEVQRCEQLGLDRLNFHPGSHLKKIS
EDECMSKISEAMNITLEKTKGVSLVLENTAGQGSNLGWRFEHLAQIIDKIEDKSRVGVCI
DTCHMFSAGYDIRTREAYDKTWSEFDKIIGFKYLMGMHINDSKAKFDSHVDRHHSLGKGE
IGLDAFKFIMNDDRMNDIPLILETIDSTIWKDEIKLLYSFEN
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagcaataagtttgtaggagcacatgtaagtgcaagcggcggagtttttaatgcagtt
gaaaatgccgttgaaataggggcaaaagcttttgcactatttactaaaaaccagagacaa
tggagtgcaaaacctcttgataatgagactatagataagtttaaaaaggctctgcaagag
agcggtattttgccccgtcatgtacttccgcacgactcatatcttataaacatcggccat
cccgaagcagataaaagagaaaaatcaatggatgcttttttggatgaggtacaaagatgt
gagcagcttggacttgacaggcttaattttcatccgggaagtcatctaaaaaagataagc
gaagatgagtgtatgagtaaaatttctgaggctatgaatatcactcttgaaaaaacaaaa
ggtgttagtttagtgcttgaaaacactgcaggacaaggtagtaatcttggttggagattt
gagcatttggcacaaataattgataaaatagaagacaaaagccgtgtcggagtctgtata
gatacttgccatatgtttagtgcaggttatgatataagaacaagagaagcttatgataaa
acatggagtgaatttgataaaatcataggatttaagtatttgatggggatgcatatcaat
gattcaaaagcaaaatttgattcgcatgttgacagacatcactctctaggcaaaggtgaa
attggacttgatgcttttaaatttattatgaatgatgatagaatgaacgatattcctctt
atacttgaaactatagacagtactatttggaaagatgaaataaaattgctttactctttt
gaaaattga
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