Sulfurimonas sp. CVO: CVO_04030
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Entry
CVO_04030 CDS
T06373
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sulc
Sulfurimonas sp. CVO
Brite
KEGG Orthology (KO) [BR:
sulc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sulc03016
]
CVO_04030 (truD)
Enzymes [BR:
sulc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CVO_04030 (truD)
Transfer RNA biogenesis [BR:
sulc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CVO_04030 (truD)
Prokaryotic type
CVO_04030 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QHG91059
LinkDB
All DBs
Position
790897..791973
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AA seq
358 aa
AA seq
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MDRFYSLDHSSIDFHFKQTPRDFVVEEIPLYEFSGEGEHLILFVRKKELSTLELVSIISK
YLGIQQKEIGYAGLKDKHAMTKQYISLHKKHEEKMNAFEHEGIKILSKTYHNNKIRIGHL
NGNRFFIKLKKVNPTSAKKIDEALKNIAKFGMPNFFGYQRFGTDGNNHIDGEKIAKGEKK
ERNPKVKKFLISAYQSHLFNLWLSRRLEINTLVQKFEVNELEPLLNISKDELTKMKAQKH
PFKLISGDIMEHYPYGRLFDFEGTEHDLNRFNEKDISVTGLLCGKKAKLSSDVARVIEKE
FDDEINADGTRRYAWVYPEGVEGRYKNEEAQYELNFSLPKGSYATVLIEEIAKREIRE
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggatagattttattcgctagaccactcaagtatagattttcattttaaacagacacca
agagactttgtggttgaagagattcctctttatgaattttcaggggagggtgagcactta
attttatttgttagaaaaaaagaactctcgactcttgaacttgtttcgataatttccaaa
tatttggggatacagcaaaaagagatagggtatgctggtttaaaagataagcatgcaatg
acgaaacagtatatctctttgcacaaaaaacatgaagagaagatgaatgcatttgagcat
gaaggtataaaaatattatcaaaaacctaccacaacaacaagataagaatagggcattta
aacggtaacagattttttataaaacttaaaaaggtaaacccgacttctgcaaaaaaaata
gatgaagctctaaaaaacatagcaaagtttggaatgccgaatttttttggttatcagcgt
tttggaactgacggcaataaccatattgacggtgaaaaaattgcaaaaggtgaaaaaaaa
gagcgcaatcctaaggtaaaaaaatttcttatcagtgcttatcaaagccatctttttaat
ttatggctaagcagaagattggaaattaatactttagttcaaaagtttgaagtaaatgag
ttagagccactgcttaatatatcaaaagatgaattgacaaaaatgaaagcgcaaaagcac
ccttttaaactaataagcggggatattatggaacactatccatatggcaggcttttcgat
tttgagggtactgagcatgatctcaatagatttaatgaaaaagatatctctgttaccggt
ttactctgtggtaaaaaagccaaactctcttctgatgtggcaagagttattgaaaaagag
tttgacgatgagataaatgcggatggtacaagaagatatgcatgggtatatcctgaggga
gttgaaggaagatacaaaaatgaagaggcacagtatgagcttaacttttcgcttccaaaa
ggctcttatgccacggttttaatagaagagatagcgaagagagagataagggagtag
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