Sulfurimonas sp. CVO: CVO_06220
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Entry
CVO_06220 CDS
T06373
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sulc
Sulfurimonas sp. CVO
Pathway
sulc03420
Nucleotide excision repair
sulc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sulc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CVO_06220
03430 Mismatch repair
CVO_06220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sulc03400
]
CVO_06220
Enzymes [BR:
sulc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CVO_06220
DNA repair and recombination proteins [BR:
sulc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CVO_06220
MMR (mismatch excision repair)
Other MMR factors
CVO_06220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
ResIII
Hemocyanin_N
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
QHG91455
LinkDB
All DBs
Position
complement(1232294..1234369)
Genome browser
AA seq
691 aa
AA seq
DB search
MPLSRLNEEQYLAATSKNRQNLIIASAGTGKTSTIVGRIAYLLDSGVKPQEILLLTFTNK
AAAEMVQRVADFFGSDVASKIDAGTFHAVSYRWLKKEDKKVVLKQQRELKTLFRSVYEKR
SFGHIGAEIMPYGGNYLYDVYSFYQNTELVDNFEEWVKNRYPEHELFAMIYADIVDEFEA
LKKEYGFVNFNDLLLNFRDMCKSKDLGYKEVLVDEYQDTNALQGTLIDAMNPPSLFCVGD
YDQSIYAFNGADISIIGSFSKKFQNAQVHTLTKNYRSTVPILSLASKVIEHNERIYPKKL
EVTRGHTSQSPTLLAYDELFDQYHDIARKIGATQTPQEEIAVIFRNNSSADGIEVGLREL
GISCKRKGGTSFFDSREVKAVLDFYTLLVNESDMMAFIHLFEFARGIGSAMAKELYIALK
TLGHGSIFYGLYAPDESNKNPFEKRKLNHQLGLFDDFLELGSVGKFAKLGFEDKFMRNPI
LKHPKLTKENATFLHDFYLLFRDLKGVKQPRIIVKKIAESAIYRYIAESLANRRAQLKDG
TIDEKQKADALSKIARKMILLEELSKPYGEHERFLNAMILGSSDLTQGEGVNLLSVHASK
GLEYKEVYIVDLMDGRFPNRKLMQRGGSLDEERRLFYVAVTRAKDILYLSYAKYDKIKKL
NFLPSQFLYEAGLVPKDEAYRAMVLKDEDKQ
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
ttgccactttcgcgtttaaatgaggaacaatacctcgctgcaacatcaaaaaacagacaa
aatctcatcatagcttccgcgggaacgggcaagacctctacgattgtgggcagaatcgct
tatcttttggattcgggcgtaaaaccccaagagattttgcttcttacttttacaaataaa
gctgctgccgagatggttcagcgcgttgcagattttttcggcagcgatgtagcttcaaag
atagatgcggggacatttcatgcagtaagctacagatggcttaaaaaagaggataaaaaa
gtcgttttaaagcagcagcgagagctaaaaacactctttagaagtgtctatgaaaagcga
tctttcggtcatattggagctgaaataatgccttatggtggaaattatctctatgatgtc
tactccttttaccaaaatacggaacttgtagataattttgaggagtgggttaaaaacaga
taccctgaacatgaactctttgcgatgatctacgcggacattgtcgatgagtttgaagct
ctaaaaaaagagtatggctttgtaaactttaatgatctgcttttaaattttagagatatg
tgcaagagtaaagatttgggttataaagaggtgctagtcgatgagtatcaggacacaaac
gcgcttcaaggcacgcttatagatgcaatgaatccgccatcactattttgtgtcggggat
tacgaccagagtatttatgcttttaacggtgcggatatctccatcattggttcattttcc
aaaaaatttcaaaatgcgcaggtgcacactctgacaaaaaattatcgctctaccgtgccg
atactctcacttgcttcaaaagtcatagagcacaatgagcgcatttacccaaaaaaactt
gaagtcacacgcggacacacttcccagtctccgacgctgctggcttatgatgagcttttt
gaccaatatcatgatatagctagaaaaataggtgcaacgcagacgccgcaggaggagata
gccgttatatttagaaacaactcctcggctgatggcatagaggtcggacttcgcgaactc
ggcatctcgtgcaaacgaaaagggggaacaagcttttttgattcacgcgaagtaaaagcg
gttttagatttttatactttgcttgtaaacgagtcggatatgatggcatttatacatctg
tttgagtttgcaagaggcattggaagtgcgatggcaaaagagctctatattgctctaaag
acattagggcatgggagcatattttacggtctttatgcacctgatgagtcaaacaaaaat
ccgtttgagaagagaaaactaaaccatcagctcggtctttttgatgattttttagaactt
ggcagtgtaggaaagtttgcaaagcttggatttgaagataaatttatgcgcaatccgatt
ttaaaacatccaaaacttacaaaagagaacgctacttttttgcatgatttttacttgctc
tttcgagacttaaaaggagtgaaacagccgcgtatcatcgtaaaaaagattgcagagtct
gcaatatacagatatatagcagagtctctagcgaacagaagagcacagcttaaagacggc
actatcgatgagaagcaaaaggcggacgcactctctaagatagccagaaaaatgattttg
ttggaagagctctcaaagccctacggcgaacatgagagatttttaaatgccatgatactt
ggttcatcggatttgacgcagggtgagggagtaaatctgcttagcgtgcacgcttcaaaa
gggctagaatacaaagaggtctatatagtagatttaatggatggacgctttccaaatcgc
aaacttatgcagagaggcggttctttagatgaggagagaaggcttttttatgtagcagta
acgcgtgcaaaagatattctttatctcagttatgcaaagtatgacaagattaaaaaactc
aattttttgccttcacaatttttatatgaggcaggtttagtaccaaaagatgaggcctat
agagctatggttttaaaagatgaggataaacaatag
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