Sulfurimonas sp. CVO: CVO_06965
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Entry
CVO_06965 CDS
T06373
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
sulc
Sulfurimonas sp. CVO
Pathway
sulc00541
Biosynthesis of various nucleotide sugars
sulc01100
Metabolic pathways
sulc01250
Biosynthesis of nucleotide sugars
Module
sulc_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
sulc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CVO_06965 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sulc01005
]
CVO_06965 (rfaD)
Enzymes [BR:
sulc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
CVO_06965 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
sulc01005
]
Core region
CVO_06965 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
QHG91585
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Position
complement(1389849..1390859)
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AA seq
336 aa
AA seq
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MRYINDDLKDKTILITGGAGFIGSNLAFYFQNNHPEANIIILDSFRSGKTLSNGNLKSFG
HFKNLIGFRGEVISGDINDKDLLLNLELNYKFDYIFHEAAISDTTALEQDLMIKTNVNAY
KDLLEVAIKHNANMIYASSAATYGNALSPQIVGRESPQNVYGFSKLCMDNLSKEYMKKSN
IAIVGLRYFNVYGPREYFKNTTASMILQFGHQILAGKNPRLFENSDKILRDFIYIEDVIQ
ANIKAMHPKESGIYNVGTGRARSFQDIVDILQKELDTTLKCEYIKNPFIGSYQFHTEADI
SSTKEKLGYEPGFEMEDGIKAYVDEIKRVYAQEVKK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagatacataaatgatgatttaaaagataaaacaattttaataactggcggtgcaggc
tttattggttcaaatttggcattttattttcaaaataatcatccagaagcaaatataatt
attcttgatagtttcagaagcggcaaaacactttccaacggtaatcttaaaagttttgga
cattttaaaaatttgataggttttagaggtgaagtaatcagtggtgatattaatgacaaa
gatttgttgcttaatttagaattaaattataaatttgattatatttttcacgaagctgcc
atatctgatacaactgcacttgaacaagatttaatgataaaaacaaatgtaaatgcttat
aaagatttgttggaggtcgccataaaacacaatgcaaatatgatatacgcatcatctgca
gcgacatatggaaatgcactctctcctcaaatagttggacgagaatcgcctcaaaatgtt
tatggtttctctaaactctgcatggataatttaagcaaagagtatatgaaaaaaagtaat
atcgcaatagtaggtcttagatattttaatgtttacggtccaagagagtattttaaaaat
acaaccgcttctatgattttgcagtttggacatcaaatattagcaggtaaaaacccacga
ctttttgaaaatagtgataaaatacttagagattttatatatatagaagatgtcattcag
gccaatataaaagctatgcatccaaaagagagcggaatttataatgtcggaacaggcaga
gctagaagttttcaagatatagtagatatattgcaaaaagagttagatacaacattgaaa
tgtgaatatataaaaaatccttttatcggaagctatcagtttcataccgaagctgatatt
tcatcaacaaaagagaaacttggatatgagcctggatttgaaatggaagatggaattaaa
gcgtatgtagatgaaattaaaagagtatatgctcaagaagttaaaaaatga
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