Sulfurimonas sp. CVO: CVO_07580
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Entry
CVO_07580 CDS
T06373
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sulc
Sulfurimonas sp. CVO
Pathway
sulc03420
Nucleotide excision repair
sulc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sulc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CVO_07580
03430 Mismatch repair
CVO_07580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sulc03400
]
CVO_07580
Enzymes [BR:
sulc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CVO_07580
DNA repair and recombination proteins [BR:
sulc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CVO_07580
MMR (mismatch excision repair)
Other MMR factors
CVO_07580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
FSIP1
eIF3_p135
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
QHG91694
LinkDB
All DBs
Position
complement(1511700..1513748)
Genome browser
AA seq
682 aa
AA seq
DB search
MKKIFEKLNDSQASAVKQTEGPVLILAGAGSGKTTTVVSRLAYLIKGIGIPASNTLTLTF
TNKAAKEMRERASAMMDNLAYPPLLCTFHKFGLLFLKFNIHLLKRENNFVVIDTDDKKRI
IKKINSEIPTSLIASEISRYKSSLLTPDDAYKQAEIFNYQQIAKVYEEYENYLLENNLVD
FDDLIALTYKLLDENEELARATSEKYRYIMIDEYQDTNELQLKLLQKLCTVHKNICVVGD
DDQSIYGWRGAHIRNIIEFDKDFEGTAIFKLEENYRSKEPILKVANSLIEHNRSRLGKKL
IPTRGSGEDVTVLNSADENEEARKIASKIAKLLDSGVKAQNIAVLYRVNVLSRSIEEGLN
RAGIAYKLVGGLRFYDRAEVKDLISYIRVITNFHDDFSFKRIVNKPKRGLGKASVDKIEL
AAHKNEISIFEYITKVSLADLESLVKKKNAKTLKKFVKDIQSVAKEATESTYNFIDILED
TFHLKDIYKGMPDEVERVLNMDEFYGLFRDFVKNSPESSLDEFLNELTLQSEQDQVEGES
IYMMSIHASKGLEFDHIFIIGLEEGFLPLVGDGSDLEEERRLGYVSFTRAKETLTLSHVD
SRFYKGRRSDLQKSRFFNEAGLCEGSLIVEKNTAFKKGDLVRHKIFGTGRVIGVSKSGRE
FKLNINFAGTKRDILASFVERL
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatatttgaaaaattaaacgattcgcaggcaagtgctgtaaagcaaacagag
ggtcctgtgttgattttagccggcgcaggaagcggaaaaacgactactgtcgtttctcgt
ttggcttatcttataaaagggattggaattcctgcttcaaatactttaacacttacattt
acaaataaagctgccaaagagatgagagagcgtgcttctgctatgatggataatctagct
tatccaccgctattgtgtacttttcataaatttggattactttttttaaaatttaatatt
catcttttaaaaagagaaaataattttgtagttattgataccgatgataaaaaacgaatt
attaaaaaaataaacagtgaaattccaacatcacttattgcaagtgaaatatcaagatat
aagagttcgcttctaactccggatgacgcttataagcaggcagaaatatttaattatcaa
cagatagcaaaagtttatgaagagtatgaaaattatctgttagaaaataatttggtagat
tttgatgatttgatagcacttacatataaacttttagatgaaaatgaggagcttgcccga
gctacttctgaaaaatatcgctatataatgatagatgagtatcaagatacaaatgaactg
cagcttaaacttttacaaaaactttgcactgtgcataaaaatatatgtgtagtcggtgat
gatgatcaaagcatttatggctggcgcggtgcacatataagaaacattatagagtttgat
aaagattttgaaggtactgctatttttaaacttgaagagaattatcgctcaaaagagccg
attcttaaagttgcaaattcgctaatagaacacaatagatcaagacttggcaaaaaactt
atccccactcgcgggagcggtgaagatgtgactgttttaaattctgccgatgagaatgaa
gaggcaagaaaaattgcttcaaagattgcaaagcttttagattcaggtgtaaaagcgcaa
aatatagcggtgctgtatcgcgtcaatgtcttaagccgttcaattgaggaagggctaaat
cgtgccggtattgcatataagcttgtcggaggtctgagattttatgatagagcagaggta
aaagatcttataagctatattagagttattacaaattttcatgatgacttttcatttaaa
cgaatagtaaataagccaaaaagaggcttgggaaaagcaagcgtagataaaatagagttg
gctgcacataagaatgaaatttcaatatttgaatatatcacaaaagtttctctcgcagat
ttagagtctttggttaaaaagaaaaacgctaaaacgcttaaaaaatttgtaaaagatatt
caaagtgtagcaaaagaggcgacggaatctacttataactttatagatattttagaagat
actttccatcttaaagatatctataaaggtatgcctgacgaagtagaaagagttttaaat
atggatgagttttatggtctctttagagattttgtaaaaaattctccagaatcttcgctt
gatgagtttttaaatgagcttacacttcaaagtgagcaggatcaggtagagggagagagt
atttatatgatgagtattcatgcttccaaaggtttggagtttgaccatatttttattata
gggttagaagaggggtttttgcctcttgtgggtgatggaagtgatcttgaagaggagaga
cggcttggctatgtttcttttacaagagcaaaagagacattgaccctttctcatgtagat
agcagattttacaaggggcgaagaagcgatttgcaaaagagcagattttttaatgaagcg
ggactttgtgaaggttctttgatagtcgagaaaaacacggcttttaaaaaaggtgatttg
gtacgccataaaatctttgggacaggaagagtaataggagtaagtaaatccgggcgggaa
tttaaactaaacattaactttgcaggcacaaaaagagatatcttagcctcctttgttgag
agactatga
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