Sulfurimonas sp. CVO: CVO_07625
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Entry
CVO_07625 CDS
T06373
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sulc
Sulfurimonas sp. CVO
Pathway
sulc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sulc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CVO_07625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sulc03019
]
CVO_07625
03016 Transfer RNA biogenesis [BR:
sulc03016
]
CVO_07625
Enzymes [BR:
sulc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CVO_07625
Messenger RNA biogenesis [BR:
sulc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CVO_07625
Transfer RNA biogenesis [BR:
sulc03016
]
Prokaryotic type
tRNA degradation factors
CVO_07625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
OB_RRP5_4th
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QHG91701
LinkDB
All DBs
Position
complement(1518788..1520953)
Genome browser
AA seq
721 aa
AA seq
DB search
MKYNVKIDLENRSEEYSFTEVARQANGSAWVKSGNTVILATVVIDETEIVKDDFLPLTVQ
YIEKTYAAGKIPGGFFKRETKPSDFETLTSRIVDRSLRPLFPKGFGHPTQITIMTFSVDA
EADLQILALNAASAALFVSDIDINKSVSAVRAAKIDGELILNPTLSQLNESTLDLYLSGT
KDELLMIEMRSIGGERVNSTLSVDPLMDPTMSAPIITTHISNAVNEDELISVLEEAEKLL
FANNVKYEDSFQEFKKETLEIEYKAHVINEEMVDYVRKHHFSDIKSAMNQMAKSERSTAL
RALRKKIIITQEHWDEVELKDAIEKVKREQVRAQILEERVRADGRALNEIRPIFISTNLL
PRAHSSCLFTRGQTQALVVLTIGGAKDAQMFETLTDESAQNENFMVHYNFPGFSVGEASP
IMGTKRRELGHGNLAKRALEPIVDLDGQTIRLVSEILESNGSSSMATVCGGYMALRAADI
DTSDTIAGIAMGMVSDGDKYAILSDIMGLEDHDGDMDFKVTGSKEGITAMQMDIKLGGIS
LDILKEALYQAKEGRSHIIDIMQEAEKEIEFNEGVLPSTDFFHIHPSFIGDIIGQAGKTI
REIIEKFEVAIDIDKKVGKVKVTGKSKSGVKAAREHIEGIVNAPKVAKIEYKVGEKYKGI
VKKIVDFGAFIELPDGTDGLIHISKISDQRVDKVSDVLKEGDEIDVEILEFKGNKISLGR
A
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaaatataatgttaaaatagatttagaaaatagaagtgaagagtactcttttaccgaa
gttgcaagacaggcaaatggttcagcatgggtaaaaagcggtaatacagttattcttgca
acggttgtaatagacgagacggaaatagtaaaagatgattttcttcctcttacagttcaa
tatattgaaaaaacatatgcagcaggtaaaatcccaggcggatttttcaagcgtgagaca
aaaccaagtgattttgaaactttaacatcccgtatagtggatcgttcacttcgcccgctt
tttcctaagggttttggacatcctacgcaaattacaattatgacttttagtgtagatgca
gaggcagatttacaaattttagcgttaaatgccgcatcggctgctttgtttgtcagtgat
attgatattaacaagtcagtttctgctgtaagagctgcaaaaattgatggagagttgata
cttaatccaacgctttctcaacttaatgaatctacactcgacctttacttatctggaaca
aaagatgaacttttgatgattgagatgagaagtatcggtggagaaagagtaaatagtact
ttatcagtagaccctttaatggatccgacaatgagcgctcctatcataacaacacatata
tcaaatgcagtaaatgaagatgagctaataagtgttttagaagaggcagagaagctgctt
tttgcaaataatgttaagtatgaagattcattccaagagttcaaaaaagagacattggag
atagagtacaaagcacatgtaatcaatgaagagatggtggattatgtaagaaaacatcat
ttttcggatataaaatctgcaatgaatcagatggcaaaatcagaacgctcaacagctcta
agagcgcttagaaaaaaaattattattacgcaagagcattgggatgaggtagagctaaaa
gatgcgattgagaaagtaaaaagagagcaggtaagagctcagatacttgaggaaagagtt
cgcgctgatggcagagctttaaatgagattagaccaatattcattagtacaaatctgctt
cctcgtgcgcactcatcatgtctttttactcgtggacaaactcaagcgcttgttgttctt
acaattggaggagcaaaagatgcgcaaatgtttgaaaccttgactgatgaaagtgcgcaa
aatgaaaattttatggttcactataactttcccggatttagcgtaggtgaagcttctcct
ataatgggaacaaaaagaagagagcttggacatggaaatttagcaaaaagagcgctagag
cctatagttgatcttgatggccagacaattagattggtttctgagattttggaatcaaat
ggttcctcttcaatggcaaccgtttgcgggggctatatggcacttcgcgcagcagatatc
gatacaagtgatacaattgccggaatcgcaatgggaatggtaagcgatggtgataaatat
gcaattttatcagatattatgggacttgaagatcatgacggggatatggattttaaggta
acaggttcgaaagagggaataactgctatgcagatggatataaaactcggcggtataagc
ttagatatcctaaaagaggcactctaccaggcaaaagagggaagaagccatattatagat
attatgcaagaagctgaaaaagagatagagtttaatgagggagttttgccaagtacagat
ttttttcatattcatccaagttttataggtgatattatcggtcaagccgggaaaacaatt
cgtgaaattattgagaaatttgaagttgccattgatatagataaaaaagtgggaaaagtt
aaagtaacaggcaaaagcaaaagcggtgtaaaagctgcaagagagcatatagaaggaatt
gtcaatgctccaaaagttgcaaaaattgagtataaagtaggcgaaaaatataaaggtatt
gttaaaaaaatagttgattttggtgcatttatagaacttccagatggaacggatggactt
atccatatctcaaaaatatctgatcaaagagtagataaagttagtgatgttcttaaagag
ggtgatgaaatagatgtagaaattttggagtttaaaggcaataaaatttctttaggccgt
gcgtaa
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