Sulfurimonas sp. CVO: CVO_08740
Help
Entry
CVO_08740 CDS
T06373
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sulc
Sulfurimonas sp. CVO
Brite
KEGG Orthology (KO) [BR:
sulc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sulc03032
]
CVO_08740 (topA)
03400 DNA repair and recombination proteins [BR:
sulc03400
]
CVO_08740 (topA)
Enzymes [BR:
sulc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CVO_08740 (topA)
DNA replication proteins [BR:
sulc03032
]
Prokaryotic type
DNA Topoisomerases
CVO_08740 (topA)
DNA repair and recombination proteins [BR:
sulc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CVO_08740 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF7129
Toprim_4
DNA_pol3_a_NI
Motif
Other DBs
NCBI-ProteinID:
QHG91900
LinkDB
All DBs
Position
1713758..1715980
Genome browser
AA seq
740 aa
AA seq
DB search
MNLIIVESPAKAKTIKNFLGKDYEVIASKGHIRDLPKSRFGITVDEENHLVPAYSVAKEN
MPTVKQIKDLAKKSDTIYIATDEDREGEAIGWHIAHAIKKDPEELPRIVFHEITKTAINN
ALQNARKIDMNMVNAQQARRLLDRVVGYKLSPLLSSKIQKGLSAGRVQSSALKIVVDRER
EIKAFVPQEYWTIDTLFKKDIEANLISHNEEKLSKLSITNKERADAIVKSVKNDSFVISK
IETKERKSSTPPPFMTSTLQQVASSKLGFTPKKTMMVAQALYEGVKTPDGTSGVITYMRT
DSLNLASEAVSAVRDVIKSRFGEKYLPKTPKVYTKKAKGAQEAHEAIRPTMLEFTPEAAQ
SFLKPDEIKLYRLIYERFMACQMNDAVFEQQSIIFSGKENEYRASGRKLIFDGFYALLGT
EDKDKLLPALKEGDAAQLQSIKPEQHFTEPPARYSEAALIKKLESEGIGRPSTYAPTIAT
LSNRTYVTIEKKQIIPTEMAFTVTDILEKNFADIVDVSFTADMEEELDKVAEGENDWQKL
LSDFYFPFIEKVKEGKDKIVSLKVAKPLGRACPKCGEELLLRSGRFGEFIACSGFPKCKY
TEQVESEKEDKEKKESESSNEICDKCGKEMVVKSGRNGPFLACSGYPECKNTKSISVEEK
VSETPCPECGGKLSLKNSRRGPFWGCENYPDCKFISKFEPTTIKCKEDGCDGALAKRVYR
GKEVYECIKCKKRTPAEEIE
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
ttgaacttaattattgtcgaatcaccagcaaaagctaaaaccatcaaaaactttttaggt
aaggattatgaggttattgcatccaaaggtcatatacgagatcttccaaagtctcgtttt
gggattaccgtagatgaagagaaccatctcgtaccggcttacagtgttgcaaaagagaat
atgcctaccgtaaaacagataaaagatttagccaaaaaaagtgatacgatatatatcgca
accgatgaggaccgcgagggagaagctattggatggcatatagcgcatgctataaaaaag
gaccccgaagagcttcctagaatagtatttcatgagataacaaaaactgcaatcaacaat
gcgcttcaaaatgcaagaaaaattgatatgaatatggtaaatgcacagcaggcgcgccgt
ctgcttgaccgtgtggtcggttacaaactctctcctcttttaagttccaaaatccaaaaa
ggtctctcggcaggtcgtgttcaatcctcagcacttaagattgtggttgaccgcgaaaga
gagattaaagcttttgttcctcaagagtactggacaattgatactctgtttaaaaaagat
atagaagcaaatcttatatcacacaatgaagaaaagctctcaaaactatcaataacaaac
aaagagagagcagatgctatcgtaaaaagtgtaaagaatgactcttttgtaatctctaaa
atagaaacaaaagagagaaaaagttcgactcctccgccatttatgacctcaactcttcaa
caagttgcttcaagcaaactcggatttactccgaaaaaaacaatgatggtcgctcaagct
ctttatgaaggtgttaaaactccagatggaacttcaggtgttattacctatatgagaacc
gattcacttaacctggcatctgaggcagtgagtgcggttcgtgatgtaattaaaagcaga
tttggagaaaagtatctgccaaaaactccaaaggtttacactaaaaaagcaaaaggcgca
caagaggctcacgaagccattcgccctactatgctcgagtttacccccgaagctgcacag
agctttttaaagcccgatgagattaaactctaccgtctgatttatgaaagatttatggca
tgtcaaatgaatgatgctgtttttgaacagcagagcattatctttagcggcaaagagaat
gagtacagagcaagcggaagaaaacttatctttgatggtttttatgcacttttaggaaca
gaggacaaggataagcttctaccggctctcaaggagggagacgctgcacagctgcaaagc
attaagcctgaacagcactttacagagcctcctgctcgctactcggaagctgcgcttatc
aaaaaactagagagcgaaggaatcggacgcccatcaacttatgcgcctactattgcaact
cttagcaacagaacctatgtaactatcgaaaaaaagcagattatccccacagagatggct
tttaccgtaacagatattttggaaaaaaactttgcagatatagtagatgtctcttttacg
gcagacatggaagaggagcttgataaagtagcagagggagaaaatgattggcaaaagctt
ttaagcgacttctactttccttttatcgaaaaagtaaaagagggcaaagataagatagtc
tcgctaaaagttgccaaacctctcggaagagcttgtcctaaatgcggagaggagctgctg
cttcgctctggaagatttggagagtttatcgcatgcagcggctttccaaagtgtaaatat
accgaacaggttgaaagcgaaaaagaggataaagagaaaaaagagtcagaatcaagcaat
gaaatatgtgataaatgcggcaaagagatggttgtaaaaagcggaagaaacggtccgttt
ttagcatgcagcggttatcctgaatgtaaaaacacaaaaagcataagcgttgaagaaaaa
gtaagcgaaactccatgtccggagtgcggcggcaaactaagccttaagaactctagacgc
ggccctttttggggatgtgaaaactaccctgattgtaaatttatctctaaatttgaaccg
acaaccataaaatgcaaagaagatggatgtgacggcgctttggcaaaaagagtttacaga
ggcaaagaagtttacgagtgtatcaagtgtaaaaaaagaacaccggcagaagagatagag
taa
DBGET
integrated database retrieval system
