Sulfurimonas sp. CVO: CVO_09670
Help
Entry
CVO_09670 CDS
T06373
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sulc
Sulfurimonas sp. CVO
Pathway
sulc03410
Base excision repair
sulc03430
Mismatch repair
sulc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sulc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CVO_09670 (recJ)
03430 Mismatch repair
CVO_09670 (recJ)
03440 Homologous recombination
CVO_09670 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sulc03400
]
CVO_09670 (recJ)
DNA repair and recombination proteins [BR:
sulc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CVO_09670 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CVO_09670 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CVO_09670 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DUF134
Toprim
Motif
Other DBs
NCBI-ProteinID:
QHG92070
LinkDB
All DBs
Position
complement(1900338..1901942)
Genome browser
AA seq
534 aa
AA seq
DB search
MQSFNNIPILNKTTLFELLSQRVGKEDTKLSQIPNPTLLHNAAKAAKKIAEAVKEGKKIV
VVGDYDVDGISSTAIMAEFFKQIPYPLETIIPNRFKDGYGVSPNILKRVNADLIITVDNG
ISAIEAAQICKKRGIELIITDHHTPSEILPDAYAIVNPKLSACSYPFEEICGAQVAWLLL
GLVKKELKLSIDMKQFLDILSIAIIADIMPLKHINRTLVKEGLKVLMRSSRPSSVIIRDF
LNKSSITSEDIAFAIAPRINSAGRLKDADIALKFLTAKTTNEAYMEFEKLNALNEQRKEL
EAKTTKIALEEVQNQGQIPNIIVAAGENWHEGVVGIVASRLVNHFEKPAIVLSVKDGIAK
GSARSLGNIDIYKLIKENKQYLTKFGGHKMAAGLGLEEKNIEMFKESINQSALTLSSSDF
IPKDEVLGILDTQDIDFELLSILESFEPYGEANLRPKFLLKDAHIVDIKLMGSDKSHSKI
TLKQHLHAKKTLELIAFRNVIEMPKDKKITCNYTISKNEFNSKVSLQLLLHKIY
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagctttaataatataccgattttaaataaaacaactctttttgaactgctttct
caaagagttggaaaagaagatacaaaactctctcaaattccaaatcccactttacttcat
aatgctgcaaaagctgccaaaaagatagctgaggctgtaaaagagggcaaaaaaatagta
gttgttggtgattatgatgttgacggtataagttcaacagctataatggctgaatttttt
aagcaaatcccttatccgcttgaaacaataattccaaaccgatttaaagacggctacggc
gttagtccaaatattctaaaaagagtaaatgcagatttaataataactgtagataacggc
ataagtgctattgaagctgcccaaatttgtaaaaaaagaggtattgaacttattattaca
gatcatcacactccatcagaaatattgcccgatgcctacgccatagtcaacccaaaactc
tctgcatgtagctatccttttgaagagatatgtggagcgcaggttgcatggctgctgctt
ggacttgttaaaaaagagttaaaactctccatagatatgaaacagtttttagatatattg
tcaattgcgataattgcagatattatgcctcttaagcatataaacagaacgcttgtaaaa
gaggggttgaaagttcttatgcgctcaagcaggccttctagtgtgattataagagacttt
ttaaacaaaagctctataacttctgaagatatcgcttttgccatagcgccgcgaattaac
tccgcaggcagactaaaagatgcggatattgctcttaaatttttaacagccaaaacaaca
aacgaagcctatatggagtttgaaaaattaaacgctttaaatgaacaaagaaaagagctt
gaagcaaaaacaacaaaaatagcacttgaagaggtccaaaatcagggtcaaattccaaat
attatcgttgcggcaggtgaaaattggcatgaaggggtagtgggtatcgtcgcttcaaga
ttggtaaatcattttgaaaaacctgccattgttctaagtgtaaaagatggcattgcaaaa
gggagtgccagaagtttgggaaatatagatatttacaaacttataaaagagaataaacag
tatctgacaaaattcggcggacacaaaatggcagcaggacttggactggaagagaaaaat
attgagatgtttaaagaatctatcaatcaatcagctttaacactaagcagcagtgacttt
ataccaaaagatgaggtgcttggaatcttagatactcaagatatagattttgaactcctc
agcatacttgagagttttgaaccctatggagaggcaaatctacgccctaagtttctactc
aaagatgctcatatagtagatattaaactaatgggaagcgataaatcccactcaaaaata
acgctcaaacaacacctgcatgcaaaaaaaactctggagcttatagcatttagaaatgtt
attgaaatgcctaaggataaaaaaatcacatgtaactatacgatctcaaaaaacgaattt
aactcaaaagtttctctgcaacttttattgcataaaatatattaa
DBGET
integrated database retrieval system
