Sulfitobacter sp. D7: B5M07_02135
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Entry
B5M07_02135 CDS
T05714
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
suld
Sulfitobacter sp. D7
Brite
KEGG Orthology (KO) [BR:
suld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
suld03016
]
B5M07_02135
Enzymes [BR:
suld01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
B5M07_02135
Transfer RNA biogenesis [BR:
suld03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B5M07_02135
Prokaryotic type
B5M07_02135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AYE85011
UniProt:
A0A386TA13
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All DBs
Position
complement(440616..441542)
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AA seq
308 aa
AA seq
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MARKRKGRDISGWLVVDKPAGPTSTAVVNKVRWALEAKKAGHAGTLDPEATGVLAIALGE
ATKTVPYIIDALKAYEFTVRLGISTNTDDAEGEVIGTSDLRPDDAAIKDVLSDFIGDIQQ
VPPQFSAVKIDGQRAYKRARDGEEMDIAARALWVESLLLLDRPDADHVTLEMVCGKGGYV
RSIARDLGQKLGCLGHVRELRRTWSGPFEAANALTLAQIDEIARTPELDTHLLPLAEGLT
ELPEVKATPEGATRLRNGNPGMVIAHDVEYGDECWASLDGQPVAVGRFKAGELHPSRVFN
LSSDTNEG
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcaaacgcaagggtcgcgatatttcaggctggctggtggtggacaaacccgcc
gggccgacatcgaccgccgtggtcaacaaggtccgctgggcgctggaggccaaaaaggcg
ggccacgcgggcacgctggaccccgaagccacaggtgttctggccatcgccttgggcgaa
gcgaccaagaccgtgccctacattatcgacgcgcttaaagcctatgagttcactgtgcgt
ttggggatttccactaacaccgacgacgccgagggcgaggtcatcggcacttccgatctg
cgccctgacgatgcggcgattaaggatgtgctgagcgatttcatcggggatatccaacaa
gtcccgccgcagttctccgccgtgaaaatcgatggccagcgcgcctacaaacgcgcccgc
gacggcgaagagatggacatcgccgcgcgcgcgctctgggtggaaagcctgctgctgctt
gatcggcctgatgccgatcacgtcacgcttgagatggtctgcggcaagggtggctatgtc
cgctccatcgcccgcgatctggggcagaagcttggctgcctcggccacgtccgcgagctg
cgccgtacctggtctggcccgtttgaggccgcgaatgccctgacactggcacagatcgac
gagatcgcccgcacgccagaactcgacacgcatctgctgccgctggccgaaggcttgacg
gaactgcccgaggtcaaagccactcccgaaggcgcgacgcgtctgcgcaatggcaacccc
ggcatggtgatcgcccatgacgtggaatatggcgatgaatgctgggcctcgctggatggc
cagcccgtcgccgtgggccgcttcaaggcaggcgagttgcaccccagccgggtgttcaac
ctatcttcggacaccaacgagggctga
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