KEGG   Sulfitobacter sp. D7: B5M07_08705
Entry
B5M07_08705       CDS       T05714                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
suld  Sulfitobacter sp. D7
Pathway
suld03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:suld00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B5M07_08705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:suld03019]
    B5M07_08705
Enzymes [BR:suld01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     B5M07_08705
Messenger RNA biogenesis [BR:suld03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     B5M07_08705
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 AAA_19 HEM4 DEDD_Tnp_IS110 SUa-2TM
Other DBs
NCBI-ProteinID: AYE86188
UniProt: A0A386TED0
LinkDB
Position
1799861..1801171
AA seq 436 aa
MSDFDMMGLPKNLVARLNEMGLKDPTPIQRQAIPQAMNGRDVMGLAQTGTGKTAAFGVPL
IAQMMELEGRPAPRSVRGLVLAPTRELAQQIAVNLRGYAEGTPIKVAMVVGGQSINTQIK
RLERGVDLLIATPGRLLDLLDRRAVKLDTTTFLVLDEADQMLDMGFIHDLRKISNLIPKE
RQTMLFSATMPKLMNEIANSYLSSPIRIEVSPPGKAADKVTQEVHFIAKAEKTELLKELL
AKHKGERALVFGRTKHGSEKLMKTLVKAGFDAASIHGNKSQGQRDRAIAGFKNGDITVLV
ATDVAARGLDIPDVKHVYNFELPNVPDNYVHRIGRTARAGKDGAAVAFCAPDEMGELKAI
QKTMGISIPVASGRPWEVIDEPSKPKGRGRGRGGRPGGGGGRPGGGGGGEGAGKPSGGRR
RRRGGGGGKPGGQQAA
NT seq 1311 nt   +upstreamnt  +downstreamnt
atgagcgattttgacatgatgggcctgccaaagaacttggtggcccggttgaatgaaatg
ggtctgaaagatccgaccccgatccaacgacaagcaatcccccaagccatgaatggccgc
gacgtgatgggccttgcccagaccggcaccggcaagacggcggcctttggtgtgccgctt
atcgcgcagatgatggagcttgaaggccgccccgcgccgcgctccgtgcgcgggcttgtc
ttggccccgacacgcgagctggcccaacagatcgccgtgaacctgcgcggctatgccgaa
ggcacgccgatcaaagtggcgatggttgtcggcggtcagtcgatcaacacgcagatcaag
cgtctggagcgcggtgtcgatctgttgatcgccacgccgggccgtctgctggacctgctg
gaccgccgcgcggtcaagctcgacaccacgaccttcctcgtgctggatgaggccgaccag
atgctcgacatggggttcatccatgacctgcgaaaaatctcgaacctgatcccgaaagag
cgtcagacgatgctgttctcggcgaccatgcccaagctgatgaacgagatcgccaacagc
tatcttagcagcccgatccgcatcgaagtctcgcctccgggcaaggcggcggataaggtg
acgcaagaggtgcacttcatcgccaaggccgaaaagaccgaactgctgaaagagcttttg
gccaagcataaaggcgagcgcgcattggtctttggccgtacaaagcatggctcggaaaag
ctgatgaagacgctggtgaaagccggtttcgacgccgcttcgatccacggcaacaaaagc
caaggccagcgtgaccgcgcgattgcgggtttcaaaaatggcgacatcactgtgctggtg
gccaccgatgtggcggcccgtggtctggatatcccggatgtgaagcacgtctataacttc
gagctgccgaacgtgcctgacaactatgtgcaccggatcggtcggaccgcgcgggcgggc
aaggacggcgctgccgtggccttctgcgcaccggatgaaatgggcgagttgaaagcgatc
caaaagaccatgggcatctcgatccctgtggcttcgggccgtccgtgggaagtgattgat
gagccgtccaaacccaaaggccgtggccgtgggcgcggtggccgtcccggtggcggcggt
ggtcgtcccggtggcggcggcgggggcgaaggcgctggcaagccaagcggtggtcgtcgc
cgtcggcgcggtggcggcggcgggaagccgggcggccagcaggcagcctaa

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