Entry |
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Name |
(GenBank) DEAD/DEAH box helicase
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KO |
|
Organism |
suld Sulfitobacter sp. D7
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:suld00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B5M07_08705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:suld03019]
B5M07_08705
Enzymes [BR:suld01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B5M07_08705
Messenger RNA biogenesis [BR:suld03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B5M07_08705
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
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Position |
1799861..1801171
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AA seq |
436 aa
MSDFDMMGLPKNLVARLNEMGLKDPTPIQRQAIPQAMNGRDVMGLAQTGTGKTAAFGVPL
IAQMMELEGRPAPRSVRGLVLAPTRELAQQIAVNLRGYAEGTPIKVAMVVGGQSINTQIK
RLERGVDLLIATPGRLLDLLDRRAVKLDTTTFLVLDEADQMLDMGFIHDLRKISNLIPKE
RQTMLFSATMPKLMNEIANSYLSSPIRIEVSPPGKAADKVTQEVHFIAKAEKTELLKELL
AKHKGERALVFGRTKHGSEKLMKTLVKAGFDAASIHGNKSQGQRDRAIAGFKNGDITVLV
ATDVAARGLDIPDVKHVYNFELPNVPDNYVHRIGRTARAGKDGAAVAFCAPDEMGELKAI
QKTMGISIPVASGRPWEVIDEPSKPKGRGRGRGGRPGGGGGRPGGGGGGEGAGKPSGGRR
RRRGGGGGKPGGQQAA |
NT seq |
1311 nt +upstreamnt +downstreamnt
atgagcgattttgacatgatgggcctgccaaagaacttggtggcccggttgaatgaaatg
ggtctgaaagatccgaccccgatccaacgacaagcaatcccccaagccatgaatggccgc
gacgtgatgggccttgcccagaccggcaccggcaagacggcggcctttggtgtgccgctt
atcgcgcagatgatggagcttgaaggccgccccgcgccgcgctccgtgcgcgggcttgtc
ttggccccgacacgcgagctggcccaacagatcgccgtgaacctgcgcggctatgccgaa
ggcacgccgatcaaagtggcgatggttgtcggcggtcagtcgatcaacacgcagatcaag
cgtctggagcgcggtgtcgatctgttgatcgccacgccgggccgtctgctggacctgctg
gaccgccgcgcggtcaagctcgacaccacgaccttcctcgtgctggatgaggccgaccag
atgctcgacatggggttcatccatgacctgcgaaaaatctcgaacctgatcccgaaagag
cgtcagacgatgctgttctcggcgaccatgcccaagctgatgaacgagatcgccaacagc
tatcttagcagcccgatccgcatcgaagtctcgcctccgggcaaggcggcggataaggtg
acgcaagaggtgcacttcatcgccaaggccgaaaagaccgaactgctgaaagagcttttg
gccaagcataaaggcgagcgcgcattggtctttggccgtacaaagcatggctcggaaaag
ctgatgaagacgctggtgaaagccggtttcgacgccgcttcgatccacggcaacaaaagc
caaggccagcgtgaccgcgcgattgcgggtttcaaaaatggcgacatcactgtgctggtg
gccaccgatgtggcggcccgtggtctggatatcccggatgtgaagcacgtctataacttc
gagctgccgaacgtgcctgacaactatgtgcaccggatcggtcggaccgcgcgggcgggc
aaggacggcgctgccgtggccttctgcgcaccggatgaaatgggcgagttgaaagcgatc
caaaagaccatgggcatctcgatccctgtggcttcgggccgtccgtgggaagtgattgat
gagccgtccaaacccaaaggccgtggccgtgggcgcggtggccgtcccggtggcggcggt
ggtcgtcccggtggcggcggcgggggcgaaggcgctggcaagccaagcggtggtcgtcgc
cgtcggcgcggtggcggcggcgggaagccgggcggccagcaggcagcctaa |