Sulfitobacter sp. D7: B5M07_15795
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Entry
B5M07_15795 CDS
T05714
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
suld
Sulfitobacter sp. D7
Pathway
suld03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
suld00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B5M07_15795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
suld03019
]
B5M07_15795
03009 Ribosome biogenesis [BR:
suld03009
]
B5M07_15795
Enzymes [BR:
suld01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B5M07_15795
Messenger RNA biogenesis [BR:
suld03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B5M07_15795
Ribosome biogenesis [BR:
suld03009
]
Prokaryotic type
rRNA helicases
B5M07_15795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
ThylakoidFormat
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AYE87458
LinkDB
All DBs
Position
3210444..3212537
Genome browser
AA seq
697 aa
AA seq
DB search
MIQTIADALAQQGYETLTAVQEAVTDPALNDQDLLVSAQTGSGKTVGFGLAIAPTLLGDD
SHFGQAGAPLALIIAPTRELAMQVSRELTWLYGKAGAVVTTCVGGMDTRTERRALDRGAH
IVVATPGRLCDHIKRNNINLDAIRAVVLDEADEMLDLGFREDLEFILSESPEERRTLLFS
ATVPAAIAKLAKSYQRDAQRITTVSEAKQHSDIEYRALNVHPRDTENAIINVLRFYEAKN
AIVFCNTRAAVARLTTRFTNRGFSVVALSGELTQSERTNALQALRDGRARVCIATDVAAR
GIDLPNLELVIHADLPSNSDTLLHRSGRTGRAGRKGVSALIVPAKLRSKANRLIGGAKLK
VEWAAPPSATEVNAADEARLLADPAWSDPIPEDAEGFVANLVEQFSAEQLATAFVNLYRA
RQSAPEELAEPGAPGDDKPRPAFGKSVWFSISTGRNDGAEPRTLLPMLCRRGDLTKDDIG
AIRVQGSHSFVEVLETSVPGLLSALGGDMKLEEGAVLTQLDKAPDLARGPKPGGNRGPKP
GGGYKGDRDRGPRPPRDNYDPDAAPAPRKPRAKAADGPGAASFDKPKYDKAKFDKPRAPK
GERPPKSHKTERSPMKPGATPKPKSGGETTGKPKAKAVWKKEKPAGDAPRKGKGKPTTSA
TTPGGEKSYKRASDPSKRFTPPNKIGKQGGKGGPKSK
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
gtgatccagactattgccgatgcccttgcccaacagggttatgaaacacttaccgccgta
caggaggccgtcacagacccagcgctgaacgatcaagaccttctggtttccgcccaaacc
gggtcgggcaagacggtgggctttggcctcgccatcgcgccgacactcttgggcgacgac
agccatttcggccaagcaggcgcaccgctagcgctaattatcgcgcccacacgcgaattg
gcgatgcaggtcagccgcgaactgacgtggctttatggcaaagcgggcgcggtggtcacc
acctgtgtcggcggcatggacacccggaccgagcgccgcgcgctggaccggggcgcacat
atcgtcgtcgccacgccgggccgtctgtgtgaccacatcaaacgcaacaacatcaacctc
gacgcgatccgcgccgtggtgctcgacgaagcggatgagatgctcgacctcggcttccgc
gaagaccttgagttcatcctctccgaatcccccgaagagcgccgcacgctgctgttctcg
gccaccgtgcctgcggcgattgccaaactggcgaaatcctaccagcgcgacgcgcagcgc
atcaccacggtgagcgaagccaaacagcacagcgatatcgaataccgcgcgctgaatgtg
cacccgcgtgacactgaaaacgcgatcatcaacgtgctgcgcttctatgaagccaagaac
gccatcgtgttctgcaacacccgcgccgccgtggcgcgcctgaccacacggttcaccaac
cggggtttctcggtcgtggcgctgtcgggtgagttgacgcagtctgagcggaccaacgcg
ctgcaagcgctgcgcgacgggcgggcccgcgtttgtattgcgacggacgtggccgcacgc
ggcatcgacctgccaaaccttgaactggtgatccacgccgatctgcccagcaactccgac
acgctgctgcaccgctcgggccgtactggccgcgccgggcgcaagggcgtttccgccctg
atcgtgcctgcgaaactgcgcagcaaagcaaaccgtctgatcggcggcgcgaagctaaaa
gtggaatgggcggcaccgccctctgccaccgaagtgaatgccgccgacgaagcccgcctg
ctggccgatcctgcatggtccgacccgatcccggaagatgccgaagggtttgtcgccaat
ctggtcgagcaattctcggccgagcaactggccaccgctttcgtcaacctctaccgcgcg
cgccaatccgcgccggaagaactggcagaacccggtgcgcccggcgacgacaaaccgcgc
ccggcctttggcaaatcggtctggttctcgatctcgaccggccgcaacgacggggccgag
ccgcgcacgctgctgccgatgctttgccgtcgcggtgatctgaccaaagacgacatcggc
gcgatccgtgtgcagggcagccacagctttgtcgaagtgctggaaacctcggttcccggt
ctgctgagcgcacttggcggcgacatgaagctggaagaaggcgcggtgctgacgcagctc
gacaaagcccccgatttggcccgtggtccgaaacccggcggcaaccgtggccccaagccg
ggtggcggctacaagggtgatcgcgaccgtggcccgcgcccgccgcgtgataactacgat
cccgatgccgcccccgccccgcgcaaaccccgcgccaaagcggcggatggccccggtgcg
gcgtcgttcgacaagccgaaatacgacaaggccaagttcgacaaaccgcgcgcgcccaag
ggcgaacgcccgccaaagtcgcacaagaccgagcgcagtccgatgaaacccggtgcgacg
cccaagcctaagtctggcggcgaaacaaccggcaagcccaaggcgaaagccgtttggaaa
aaggaaaagcccgcaggcgatgcaccgcgcaaaggcaagggcaagccgacaacctcggcc
accacgccgggcggtgagaagtcctacaaacgggcgtccgacccgtccaaacgcttcacc
ccgccgaataagatcggcaagcagggcggcaagggcggcccgaaatcgaagtaa
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