Sulfitobacter sp. D7: B5M07_16060
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Entry
B5M07_16060 CDS
T05714
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
suld
Sulfitobacter sp. D7
Pathway
suld03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
suld00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B5M07_16060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
suld03019
]
B5M07_16060
03400 DNA repair and recombination proteins [BR:
suld03400
]
B5M07_16060
Enzymes [BR:
suld01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B5M07_16060
Messenger RNA biogenesis [BR:
suld03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B5M07_16060
DNA repair and recombination proteins [BR:
suld03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B5M07_16060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
AYE87508
UniProt:
A0A386TI30
LinkDB
All DBs
Position
complement(3269312..3271357)
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AA seq
681 aa
AA seq
DB search
MTGAATLLRDVFGFDGFRPGQQEIVEAVTEGENVLAIMPTGGGKSLCFQLPALMREGVTV
VISPLIALMRDQVRSLQEAGVAAGALTSGNTSEETDAVWEALEAGTLKLLYMAPERLAAG
SAMGMLRRVGVNLIAVDEAHCVSQWGHDFRPDYLRIGELRRTLNVPLAAFTATADAETQV
EIVEKLFDGTPPRAFLRGFDRPNIHLAFAAKNKPRDQILNFAAARKGQSGIVYCGTRAKT
EGLAKALRDQGQMALHYHGGMEAEDRRIAERRFQQEDGLIVCATVAFGMGVDKPDIRWVA
HADLPKSIEAYYQEIGRAGRDGAPAETLTLFGPDDIRLRRSQIDEGLAPPERRAADHGRL
NALLGLAEALECRRQTLLGYFDETEITCGRCDLCDTPADVFDGTTAVRKALSAMLRTDEW
FGAGHLIDILLGNETDKVRQRGHQSLPTYGVGGEYSRNEWQAVFRQMMGHDLVRPDAERH
GALRMTDAALPILRGEASINLRRDTIKAAGANRRPAVKAMVSDEDAPLLSALKAKRRALA
EAARVPAYIIFTDRTLIEMAEARPQNLDAMARIGGVGAKKLENYGAAFLEVINGEAQPMH
KARRKLAGREAGNVYDQLLQVQADLARGEQGTDKPLSCSAAMLAKVAQLRSADSSAIERL
LGDKRAERFGPAFLDVLRDAG
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgacaggcgctgccacgcttcttcgtgatgtattcggtttcgacgggttccgccccggc
cagcaagagattgtggaggccgtgaccgagggcgagaacgtgcttgccatcatgcccacg
ggcggcggcaagtccttatgtttccaactccctgcgctgatgcgcgagggggtgacggtg
gtcatcagcccgctcatcgccctgatgcgcgatcaggtgcgcagcctgcaagaagcgggc
gtcgcggcgggcgcgctgacctcgggcaacacgtctgaggagaccgacgcggtttgggag
gcgttggaggcaggcaccctcaaactgctctatatggcgccggagcggctggccgcaggc
tcggccatgggcatgttgcggcgcgttggcgtcaatctcatcgccgtagacgaggcgcat
tgcgtcagccagtggggtcatgatttccgccccgattacctgcgcatcggtgaattgcgc
cgcacgttgaatgtgcccttggccgccttcaccgccacggcggacgccgaaacgcaggtt
gagatcgtcgagaaacttttcgacggcacgcccccgcgtgcctttctgcgcggctttgac
cggcccaacatccacctcgcctttgccgccaagaataaaccacgcgatcaaatcttgaac
ttcgccgccgcgcgcaagggccagtccggcatcgtctattgcggcacgcgggccaagacc
gaagggctggccaaggcgctgcgcgatcaggggcaaatggcgctccattaccatggcggg
atggaggccgaagaccgccgcatcgccgagcgtcggttccaacaagaggacgggttgatc
gtctgcgccacggtggcttttggcatgggggtcgacaaaccggacatccgttgggtcgcc
catgcggacctgccgaaatcgatcgaggcctattatcaggagattggccgcgccgggcgt
gacggggccccggctgaaaccctgaccctctttggccccgatgacatccgcctgcgccgc
agtcagatcgacgaggggctggccccgcccgaacgccgcgccgccgatcacgggcggctc
aacgctctgctcggtttggccgaggcgctggagtgtcgtcgccagaccttgctgggctat
tttgacgagaccgaaatcacctgcggacgctgcgacctctgtgatacgcccgcggatgtg
ttcgatggcaccacggcagtgcgcaaggcgctctcggccatgttgcgcactgatgaatgg
ttcggcgcggggcatctgatcgacatccttttgggcaacgagaccgacaaggtccgccag
cgcggccatcagtccctgcccacttacggcgtcggcggcgaatacagccgcaatgaatgg
caggcggtgttccgtcagatgatgggccatgaccttgtgcgccctgatgccgaacgccac
ggcgcgctgcgcatgactgatgccgccctgccgatcctgcgcggtgaggcgtcgatcaac
ctgcggcgggatacgatcaaggctgcaggggccaatcgccgacccgcggtcaaggcgatg
gtcagcgatgaagacgcgccgctgctatcggcgctcaaggccaagcgccgcgcattggcc
gaggcggcgcgcgtgcctgcctatatcatcttcaccgaccgcaccctgatcgagatggcc
gaggcgcgcccgcaaaacctagatgccatggcccggatcggcggcgtgggcgcgaaaaag
ctggaaaactacggcgccgctttccttgaggtcatcaacggcgaagcgcagccgatgcat
aaggcccggcgcaaactggcgggccgcgaggcgggcaatgtctatgaccagttgttgcag
gtgcaggccgatctggcgcgcggcgagcagggcaccgacaagccgctgagctgctctgct
gcaatgctggccaaggtggcgcagctgcgcagcgccgacagctccgcgattgaacgcttg
ctcggcgacaaacgcgccgaacgctttggccccgcttttctggacgttcttcgcgacgcg
ggctaa
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