Saccharolobus sp. E5-1-F: GFS03_06730
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Entry
GFS03_06730 CDS
T06918
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sule
Saccharolobus sp. E5-1-F
Brite
KEGG Orthology (KO) [BR:
sule00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sule03016
]
GFS03_06730 (thpR)
Enzymes [BR:
sule01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
GFS03_06730 (thpR)
Transfer RNA biogenesis [BR:
sule03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
GFS03_06730 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
DUF7755
Motif
Other DBs
NCBI-ProteinID:
QGA54290
UniProt:
A0A5Q0SJC7
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All DBs
Position
1371572..1372156
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AA seq
194 aa
AA seq
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MRLFIGIEVPQSQKLLEIFEIVKNTGADIKLVEPYNIHITLLFLGEVRDDRLEEVKDSMR
EVKFNKFRVTLKGLGAFPNLTRPRVVWVGITEGQQQLKQIRSYILNEILKRKIKPEDDKD
FSPHLTIGRVKSYNSISNLINAINENMNVDIGTFEVSNVVLFKSTLTPKGPIYDRLFEVS
SIDRGGSAKDNKTY
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgaggctctttataggcatagaagtaccacagtcccaaaaactacttgaaatattcgag
atagtaaaaaatacgggagctgacataaaattggtcgaaccatataacattcacattaca
ttattattcttaggcgaagttagggatgacagattagaagaagtgaaagattcaatgaga
gaagtaaaattcaataaatttagagtcacactaaaaggtttaggagcatttccaaattta
acaaggccaagagttgtttgggttggaatcactgagggtcaacaacagcttaaacagatt
agatcttatatacttaacgagatattaaagcgaaaaattaaaccagaagacgataaggat
ttctcacctcatctaacaataggaagagtaaaaagctacaactctattagcaacctcata
aatgcaattaatgagaatatgaacgtggatattggaacctttgaagttagtaatgtcgtt
ctcttcaaaagcacgttaactccaaaaggcccaatatatgatagactgtttgaagtgagt
tcaattgatagaggaggaagtgctaaagataataaaacctactga
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