Saccharolobus sp. E5-1-F: GFS03_07355
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Entry
GFS03_07355 CDS
T06918
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sule
Saccharolobus sp. E5-1-F
Brite
KEGG Orthology (KO) [BR:
sule00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sule03032
]
GFS03_07355
03400 DNA repair and recombination proteins [BR:
sule03400
]
GFS03_07355
Enzymes [BR:
sule01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GFS03_07355
DNA replication proteins [BR:
sule03032
]
Prokaryotic type
DNA Topoisomerases
GFS03_07355
DNA repair and recombination proteins [BR:
sule03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GFS03_07355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Sar8_2
DUF6848
Motif
Other DBs
NCBI-ProteinID:
QGA54401
UniProt:
A0A5Q0SJ59
LinkDB
All DBs
Position
complement(1491452..1493491)
Genome browser
AA seq
679 aa
AA seq
DB search
MDLCNLNNYYLIIAEKSKAAKKIAESLSEKPILCKKYNVNYWVVRDHDNSKYVIVPAAGH
LFGLQGKSGFPIYDADWKPLWEVDKNSYYTKRYYQLISSLSKHALGFINACDYDIEGSVI
GYLIIKYLGDIKKAKRMKFSALTKSDILSAFRNMSTLDYDMINAGLARHKIDWLWGINVS
RALMISLQDFAKKRVILSAGRVQSPTLVQVVNSETERNLFIPLPKFTVSIIVKIKDYSLN
IKINRDFEKITEAKEFLNKLINKTVKVVQVENKIKILERPSPFNLTDLQVEAGRIYGISP
YNVERIAEDLYLDGLISYPRTNSQKIPPTIDIYNIIKSLENSSYRKLVDLVRKIARGRYI
VRQGFKDDPAHPAIHPTGESPKNLSANKFKIYDLILRRFLASVSADAKLSNTTYTLKVTD
IPLEFSVSYTKILERNWLDIYHFHNVREDNPILLSKGDEGIVLDGKVNISLSKPTSRYTK
VSLLKWMESSNLGTESTRGRIIEILVKRRYLTNSGRYVVPTKLGFYIAEILNKFFPDIVD
VKMTADMENKLEMIKTSKVLESEVIKENIEKLNKFIEEYKVNKDKVGESLAKALGLIKIV
KCKFCDLEQYKDGLCKYHYEAKVKLLDAVKIWEERTKYDHKKILKRISSSKSTGKYVKDI
ATYMLNMNDESHANLKKMR
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggatttatgcaatttaaacaactattaccttataattgcagaaaaatcaaaagcagct
aaaaaaatcgctgaatctctctcagagaagcctattttgtgtaaaaaatataatgttaac
tattgggtagtaagagatcatgataacagtaaatatgttattgtgcctgcggcaggacat
ctttttgggttacaaggtaaaagtggctttcctatatatgatgctgactggaaaccttta
tgggaggtggataagaatagctactatacaaaaaggtactatcaacttatctcgtctctt
agtaagcatgctttaggctttattaatgcatgtgattacgatattgaaggttctgtaatt
ggctatttaataatcaaatatctaggggatattaagaaggctaaacgaatgaaattttcc
gcgttgactaagagtgatatattgtcagcatttagaaatatgtctacattagattacgat
atgataaatgctggactagctaggcataaaattgactggctatggggaattaatgttagt
agagctcttatgatttctttacaagatttcgcaaagaaaagagtgatattaagtgcgggt
agagttcaaagcccaactctcgttcaggtcgttaactcggaaactgaaagaaacctattt
attccattacccaaatttactgtttcaattatagtaaaaattaaagattattcacttaat
attaagataaatagagatttcgaaaaaattacagaagcaaaggaatttctgaataaatta
ataaataagaccgtaaaagtcgttcaagttgaaaataagattaagatattggaaagaccc
tctccatttaatctcactgatctccaagtagaagctggcagaatatatggaatatctcca
tataatgtagaacgtatagcagaagatctttatttagatgggctaataagttacccaaga
actaatagccaaaaaataccacctactattgacatctataacataatcaaaagtctagag
aatagttcatatagaaagctagttgatttagtgaggaaaattgcgagaggtagatatatt
gttaggcaaggctttaaggatgatcctgcacatcccgcaattcaccctacaggggaatct
cctaaaaatttatctgctaataaatttaagatatatgatctaatactaagaagattcttg
gcttcagtatctgctgatgctaaactatctaacactacttacaccttgaaagtaactgat
atccccttagagttctcagtttcatatacaaaaatattagaaagaaattggctagatata
tatcattttcataatgtgagggaagataatcccatacttctctcaaaaggtgatgagggt
atagttttagatggaaaagtaaatattagtctaagtaaacccacttctaggtatacaaag
gtttcattactcaaatggatggaatcttccaacttaggtacagagtctactagaggaaga
ataattgaaatcctagtgaagagaagatatttgactaatagtggtcgctatgtagttccg
acaaaattaggtttctatatcgccgagatattaaacaaatttttcccagatattgttgat
gttaaaatgactgcagatatggaaaataaattagaaatgataaagactagtaaagttcta
gaaagtgaagtcattaaagaaaatatagaaaaattaaataaatttatagaggaatataaa
gtgaataaagataaggtaggggaatctttagctaaagctttaggtctcataaaaattgta
aagtgtaaattttgtgacttggaacagtataaggatggattatgcaaatatcattatgaa
gccaaagtaaagcttttggatgctgtgaaaatttgggaggaaaggacaaaatatgaccat
aaaaagattttaaaaagaatcagtagtagtaaatcaacgggtaaatatgtaaaagatata
gcaacttatatgcttaatatgaatgatgaaagtcatgccaatctgaaaaagatgaggtaa
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