Saccharolobus sp. E5-1-F: GFS03_07895
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Entry
GFS03_07895 CDS
T06918
Name
(GenBank) RNA-binding protein
KO
K03679
exosome complex component RRP4
Organism
sule
Saccharolobus sp. E5-1-F
Pathway
sule03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sule00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GFS03_07895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sule03019
]
GFS03_07895
Messenger RNA biogenesis [BR:
sule03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
GFS03_07895
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
GFS03_07895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N_2
RRP4_S1
KH_6
RRP40_S1
S1
KH_1
PIMT_C
Motif
Other DBs
NCBI-ProteinID:
QGA54495
UniProt:
A0A5Q0SLB6
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All DBs
Position
1576167..1576910
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AA seq
247 aa
AA seq
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MSQSQKIILQPRSIVVPGELLAEGEFQIPWSPYILKINSKYYSTVVGLFDVKDTQFEVIP
LEGSFYYPKVNDVVIGLIEDVEIYGWVVDIKAPYKAYLPASNLLGRSVNVGEDLRRYLDV
GDYVIARIENFDRSIDPVLSVKGKDLGRVNNGIVIDIMPVKVPRVIGKNKSMYETLTSKS
GCSMFVANNGRIWATCPSRFSEEILIEAIRKIENESHIKGLTDRIKQFIEEKLGERNASS
GETKTNP
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagtctcagaaaattattttacagccaaggtcaatagtagtacctggcgagcta
ttagctgaaggcgaatttcagattccttggtctccctatatattaaagatcaatagtaaa
tattactccacagttgttggactttttgatgtaaaagatactcagtttgaagtgattcct
ttagaaggttcgttctactatcctaaggtcaacgatgtggtaataggtttgatagaggac
gttgagatctatggttgggtggttgacataaaagctccttataaggcatatttaccagcc
tcaaatcttttaggaaggtccgttaatgttggagaggatttaaggagatatttagacgtg
ggcgactatgttatagctagaattgaaaattttgataggtcaatagatcccgttttatca
gttaaaggtaaggacctaggtcgtgtcaataatgggatagtaattgatataatgccagtt
aaggttccgcgtgttataggaaagaataaaagtatgtatgagaccttgacctcaaaaagt
ggatgcagcatgtttgttgctaacaatggtaggatatgggctacttgtccttcccgcttt
tctgaagaaattttaattgaggcaattaggaagattgaaaatgagtcacatataaaagga
ttgacagatagaataaaacaattcattgaggaaaaattaggtgagagaaatgcttcaagt
ggagagaccaaaactaatccttga
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