Saccharolobus sp. E5-1-F: GFS03_09375
Help
Entry
GFS03_09375 CDS
T06918
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
sule
Saccharolobus sp. E5-1-F
Brite
KEGG Orthology (KO) [BR:
sule00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sule03016
]
GFS03_09375 (endA)
Enzymes [BR:
sule01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
GFS03_09375 (endA)
Transfer RNA biogenesis [BR:
sule03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
GFS03_09375 (endA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
TSEN34_N
Motif
Other DBs
NCBI-ProteinID:
QGA54770
LinkDB
All DBs
Position
1819852..1820400
Genome browser
AA seq
182 aa
AA seq
DB search
MVKALLVGSKVLIPNVDESRYIYSNGFYGKPIGISKPKGPKDIIRPLELSLIESVYLAKK
GLIKVTDKNGEVLEYEKLYEYSSKVINKFDIIYKVYEDLREKGFIVRSGVKYGADFAVYT
LGPGLEHAPYVVIAVDIDEEITPHELLSFGRVSHSTRKRLVLALVDRKSESVRYIMFKWV
KM
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaagctttattggtaggatctaaggtattaattccaaatgtagatgagtcaaga
tatatttattcaaacggcttctatggaaagccaataggaatttctaagcctaaaggccct
aaagatataattagacctttagaattatcactaattgaaagtgtctatctagctaaaaaa
ggtttaattaaagttacagacaaaaacggcgaagttcttgaatatgagaaattatatgaa
tatagttctaaggttataaataaatttgatattatttacaaagtttacgaagacttaaga
gaaaaaggattcatagttagatctggagtaaagtacggggcggattttgcagtttacacg
ttaggaccaggattagaacacgctccttatgtggttattgcagtggatatcgatgaggag
attactcctcatgagttattgagttttgggagagtctcgcacagtacaagaaaaagatta
gtattagctctagtagatcgtaaaagtgaaagtgtaagatacataatgtttaaatgggta
aaaatgtaa
DBGET
integrated database retrieval system
