Saccharolobus sp. E5-1-F: GFS03_09535
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Entry
GFS03_09535 CDS
T06918
Symbol
pcn
Name
(GenBank) proliferating cell nuclear antigen (pcna)
KO
K04802
proliferating cell nuclear antigen
Organism
sule
Saccharolobus sp. E5-1-F
Pathway
sule03030
DNA replication
sule03410
Base excision repair
sule03420
Nucleotide excision repair
sule03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sule00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GFS03_09535 (pcn)
03410 Base excision repair
GFS03_09535 (pcn)
03420 Nucleotide excision repair
GFS03_09535 (pcn)
03430 Mismatch repair
GFS03_09535 (pcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sule03032
]
GFS03_09535 (pcn)
03400 DNA repair and recombination proteins [BR:
sule03400
]
GFS03_09535 (pcn)
DNA replication proteins [BR:
sule03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
GFS03_09535 (pcn)
DNA repair and recombination proteins [BR:
sule03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
GFS03_09535 (pcn)
MMR (mismatch excision repair)
Other MMR factors
GFS03_09535 (pcn)
TLS (translesion DNA synthesis) factors
Other TLS factors
GFS03_09535 (pcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_N
PCNA_C
Rad1
Rad9
DNA_pol3_beta_3
Hus1
Pectate_lyase_5
Motif
Other DBs
NCBI-ProteinID:
QGA54802
UniProt:
A0A5Q0SJ39
LinkDB
All DBs
Position
complement(1844928..1845710)
Genome browser
AA seq
260 aa
AA seq
DB search
MICLKSFERNIRLINMKVVYDDVRVLKNIVQALAKLVDEAILKFKEDNVELVALDRARIS
LISVNLPKEMFKEYDVSEEFKFGFNTQYLMKILKVAKRKEAIEIASESPDSVIINIIGGT
NRVFNIRNLEVSEENIPEINLQFDISATISSDGFKSAISEVSTVSENVIIEGHEDKILIK
AEGESGIEVEFSKDTGGLQDLEFSKNSKNSYSAEYLDDVLSLTKLSDFVKIAFGDQKPLQ
LSFNMEGGGKVTYLLAPKVG
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgatatgtcttaaatcttttgaaaggaatataagattgattaacatgaaagtagtttac
gatgatgtgagagttcttaaaaatattgtacaagctttagccaagttagtcgatgaagcg
atattaaagttcaaggaggataatgtggaattagtagcgttggatagagctcgtatttct
cttatatcagtaaacttgcctaaagagatgtttaaagagtatgacgtaagtgaggaattc
aagtttggctttaatactcaatatttgatgaaaattctgaaagtagctaagagaaaagag
gcaatagaaatagctagtgaatctccagatagcgttatcataaatattataggaggcaca
aatagggtgtttaatattaggaaccttgaggtatctgaggaaaatattccggaaattaac
cttcaattcgatatatcagccactatttcttcagatggttttaagtcagcaatatcagaa
gtttcaacagtgagtgagaatgtaattattgagggtcatgaagataaaatattaattaag
gctgagggcgaaagtgggattgaagttgaattttctaaagataccggtggtcttcaagat
ttagaattttctaaaaattcgaagaactcatattctgcagaatatctagacgatgtctta
tcattaactaaactttcagatttcgtcaagatagcgtttggtgaccaaaaacctcttcag
ttatcctttaatatggagggaggagggaaagttacttatttattagctccaaaagttgga
taa
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