Saccharolobus sp. E5-1-F: GFS03_10120
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Entry
GFS03_10120 CDS
T06918
Name
(GenBank) RNA-binding protein
KO
K07573
exosome complex component CSL4
Organism
sule
Saccharolobus sp. E5-1-F
Pathway
sule03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sule00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GFS03_10120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sule03019
]
GFS03_10120
Messenger RNA biogenesis [BR:
sule03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
GFS03_10120
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
GFS03_10120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
Zn_ribbon_Com
S1
DUF5817
OB_RRP5_4th
Cas12f1-like_TNB
HypA
C1_1
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
QGA54909
LinkDB
All DBs
Position
1950318..1950887
Genome browser
AA seq
189 aa
AA seq
DB search
MRVQGELTLPGEELAVIEEFIAGDGTYEQNGIVRAAVVGKIFYDMLNRKSNVLGFKKIVF
QHLKKAKYVIGIVNSIKEDSALVSIVGIEEKSLASSISAYLHISQTSNKKLNSITDAIKI
GDVIKAKLLSYTFPLALTIKMKDLGVIYARCSRCGYLLIKQDENNLKCQRCGNIEQRKIG
SYMVKKGGD
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgagagttcaaggtgaattaaccctacctggagaagagttagcagtaattgaagagttt
atagctggcgatggtacgtatgaacaaaatggcatagttagagcagcggttgtaggaaag
atcttctatgacatgctaaataggaagagtaacgtactgggatttaagaaaatcgtattt
caacatttaaagaaggctaaatatgtgatcggtattgtaaattctattaaagaagattca
gcactagtttcaatagtagggatagaggagaaaagtcttgcgtcatcaatttcagcttac
ttacatatctctcaaacaagtaataaaaagcttaatagtataacagatgctataaaaatt
ggagatgtaattaaagctaaattactctcatacacttttcctttagctttaactattaag
atgaaagatcttggagttatttacgctagatgttcaagatgtggatacttattgatcaag
caagacgaaaataatttaaaatgtcagagatgcggaaatattgaacaacgaaaaatagga
tcttatatggtgaagaaaggtggagattaa
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