Saccharolobus sp. E5-1-F: GFS03_10195
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Entry
GFS03_10195 CDS
T06918
Name
(GenBank) hypothetical protein
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
sule
Saccharolobus sp. E5-1-F
Brite
KEGG Orthology (KO) [BR:
sule00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sule03016
]
GFS03_10195
Enzymes [BR:
sule01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
GFS03_10195
Transfer RNA biogenesis [BR:
sule03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
GFS03_10195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Sen15
SMMA_C
rpo132
COG2_N
TraI_hel_assoc_N
Motif
Other DBs
NCBI-ProteinID:
QGA55527
LinkDB
All DBs
Position
1961846..1962268
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AA seq
140 aa
AA seq
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MKTITFMGNILIFDNVTIMSEKSESTLDKIYTALSSSKQLPSEIIYLVNWDKVDVFVDLK
QRGRITIDGIDEQSLIIKDKENGKYTAMVLIVDENEKVSFKKILDKLHQSKSMNLELYLS
IVDKYGDVTYYTLSEIKMSK
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atcaaaacaataacttttatggggaatatacttatttttgataatgtgactataatgtct
gagaaaagcgaaagtactttagataagatatatacagcgttaagctcatctaaacagtta
cctagtgagataatttatcttgtaaattgggataaagttgacgtatttgttgacttaaaa
caaaggggaagaattacaattgacggtatagatgaacagtcgcttataataaaggataag
gaaaatggaaaatatactgctatggttttaatagtagatgaaaatgaaaaggtaagtttt
aagaaaatattggataaactacaccagtcaaaatcaatgaatttggaactttatctttca
attgtggataaatatggagatgttacatattacacattatctgagataaaaatgtcaaag
tga
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