Saccharolobus sp. E5-1-F: GFS03_10740
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Entry
GFS03_10740 CDS
T06918
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sule
Saccharolobus sp. E5-1-F
Pathway
sule04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sule00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
GFS03_10740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sule03019
]
GFS03_10740
03009 Ribosome biogenesis [BR:
sule03009
]
GFS03_10740
04131 Membrane trafficking [BR:
sule04131
]
GFS03_10740
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sule04147
]
GFS03_10740
Messenger RNA biogenesis [BR:
sule03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
GFS03_10740
Ribosome biogenesis [BR:
sule03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
GFS03_10740
Membrane trafficking [BR:
sule04131
]
SNARE
SNARE associated proteins
Others
GFS03_10740
Autophagy
Aggrephagy
Other aggrephagy associated proteins
GFS03_10740
Exosome [BR:
sule04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GFS03_10740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
AAA_5
AAA_22
TIP49
AAA_33
AAA_14
IstB_IS21
AAA_28
nSTAND3
AAA_18
Vps4_C
Mg_chelatase
RNA_helicase
ABC_tran
Parvo_NS1
AAA_24
ATPase_2
NPHP3_N
AAA_3
Sigma54_activat
AAA_17
AAA_lid_PRS2_C
TsaE
Zeta_toxin
AAA_7
NB-ARC
ATP-synt_ab
NACHT
DUF815
AAA_25
Bac_DnaA
PhoH
ATPase
SPT16
Motif
Other DBs
NCBI-ProteinID:
QGA55019
UniProt:
A0A5Q0SN56
LinkDB
All DBs
Position
complement(2051101..2053410)
Genome browser
AA seq
769 aa
AA seq
DB search
MSASSGEEQKPQRKELILRVMEARQKDVGRGKVRIDIDLLSQIDVSPGDVVEIEGTRKTA
ALAWPLSPEDTTTGEKDIIRMDGITRKNAGVSIGDKVIVRKAVVRPASTVKLAPSNFSIT
VDPGFISYVKKRLKEFPLVEGDTVLIPVLGQAIPFTVVQVKPAGIVLVNDDTIISISDKP
VEPSRYPRVTYEDIGGMKNIIEKVRELVELPLRHPELFKRLGIEPPKGILLYGPPGVGKT
LLAKAIANETDAYFTSINGPEIMSKFYGESEQRLREIFEDAKKHAPAIIFVDEIDAIAPK
RDEVIGEVERRVVAQLLTLMDGLENRGNVIVIAATNRPSAVDPALRRPGRFDREIEIPLP
DKQGRLEILQIHTRNMPLSKDVDLEKLADMTHGYTGADLSALVREAAMNALRRYLPKIDL
NQDKIPPEILESMEVKMEDFINAFKEIVPSGLREIYIEVPEVKWTDIGGLEEIKEELKEV
VEYPLKYSELYQNSGIEPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWV
GESEKAVREIFRKARMYAPAVIFFDEIDSIAPIRGISYDSGVTERIVNQLLAEMDGIEKL
ENVVVIAATNRPDILDPALLRPGRFEKLIYVPPPDKKARIEILKVHTRNIVLGEDISLED
VAEKTEGYTGADLAALVREATMRAIRESMKICIDKANENCKSTDTECRDKTMKECMKVNG
VKVSLRHFEEAMKKVKPSVTQDMLQFYQNWVEKARQQLPKTTVKPSTYA
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgctagttctggagaggaacagaaaccgcaaagaaaggagttaatacttagagta
atggaagcaagacaaaaagatgttgggagaggaaaggtacgaattgacatcgatttactt
tcacaaattgatgtaagcccaggtgacgtagttgaaattgagggaacaagaaaaactgca
gcactagcatggcctttatcaccagaggatacaacaactggagaaaaggacataatacga
atggatggaatcaccaggaaaaacgctggagtctcaattggagataaggttatagtaaga
aaagcagttgtaaggccagctagcacagtaaaactagcaccatctaacttctcaattact
gtagatccaggtttcattagttatgttaagaaacgattaaaagaatttcccctagttgaa
ggagatacagtgttaattcctgtcctaggccaagccataccgtttactgtagttcaagtc
aaaccagctggtatcgttctagtgaatgacgatacgataataagtatatctgataagcca
gtggaaccttccagatatcctagagtcacatatgaggacataggtggaatgaaaaatatt
atagaaaaagttagagagttagttgagctacctttaagacatccagaactatttaaacga
ttaggaatagagccgcctaagggtatattattatatggccctcctggagtgggaaagaca
ttactagcaaaagcaatagctaatgaaactgatgcgtactttacttcaattaacgggcca
gaaataatgagcaaattctatggagagagtgaacaaagattaagggaaatatttgaagac
gctaaaaaacatgctcctgcaataatattcgtagatgaaattgacgcaatagcaccgaaa
agagacgaagtgataggagaagtagaaagaagagttgttgcacagctactcactttaatg
gatggtctcgaaaatagaggaaacgtaatagtaatagctgcaaccaatagacctagtgct
gttgatccagccctaagaagaccaggaagatttgatagagaaatagaaataccgttaccg
gataagcaaggaagattagaaatactacaaatccatacaaggaacatgcccctatctaaa
gatgttgacctagagaagcttgcagatatgacacatgggtatactggtgctgacttgtca
gcattagtaagagaagccgcgatgaatgccttaagaagatacttgccaaagatagacttg
aatcaggataagatacctccagaaatactagagtctatggaagttaagatggaagatttc
ataaacgcatttaaagaaatagtaccaagtggcttaagagaaatttacatagaagttcca
gaggttaaatggacagatataggcggccttgaagaaataaaagaggagttaaaagaagta
gttgaatatcctctgaaatactcagagttataccaaaattctggtatagagccacctaag
ggtatattgctgtttggtccaccgggaactggaaagacaatgctggcaaaggctgtggca
actgagagcggagcaaacttcatagcagttagaggaccagaaatattatccaaatgggta
ggtgaaagtgaaaaagcagttagagaaatatttagaaaagctagaatgtacgcaccagct
gtaatattctttgacgaaatagattcaatagcaccaataagaggaatctcttatgattca
ggagtaacggagagaatagtaaatcagttattagcggaaatggatggaattgaaaaacta
gaaaacgtagtagtaatagctgcaaccaatagaccagatatcttagatccagcactatta
aggccaggtagatttgaaaagttaatatatgtacctccaccagataagaaagcaagaata
gaaatattaaaggttcatactagaaacatagtgttaggagaggacatcagcttagaggat
gtagctgaaaagactgaaggctatactggagctgatttagctgcattagtaagagaagct
acaatgagagctataagagagagtatgaaaatatgcatagacaaagctaacgagaattgt
aaatccactgacaccgaatgcagagataaaactatgaaagagtgtatgaaagttaacggg
gtcaaggtttccttaagacatttcgaagaagctatgaagaaagttaaaccatcagttacg
caagatatgctgcaattctatcaaaattgggttgaaaaggccagacaacaattaccaaaa
actacagttaaaccaagtacatatgcgtga
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