Sulfuriferula sp. AH1: CAP31_00015
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Entry
CAP31_00015 CDS
T04857
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sulf
Sulfuriferula sp. AH1
Brite
KEGG Orthology (KO) [BR:
sulf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sulf03032
]
CAP31_00015
03400 DNA repair and recombination proteins [BR:
sulf03400
]
CAP31_00015
Enzymes [BR:
sulf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CAP31_00015
DNA replication proteins [BR:
sulf03032
]
Prokaryotic type
DNA Topoisomerases
CAP31_00015
DNA repair and recombination proteins [BR:
sulf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CAP31_00015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ARU30222
UniProt:
A0A1Y0G365
LinkDB
All DBs
Position
2807..5203
Genome browser
AA seq
798 aa
AA seq
DB search
MNKEYDSNSIRILKGLDAVRKRPGMYIGDTSDGTGLHHMVFEVLDNAIDEALGGYCDDIK
VVIHADNSVSVTDNGRGIPVDIKQDDEFKRSAAEIVMTELHAGGKFDQNSYKVSGGLHGV
GVSVVNALSDWLKLRIWKNGYSYQMEFRQGEAVSPLAETGKSDRHGTEVHFFASKETFGL
IEFHYDILAKRIRELSFLNNGVKIELIDQRDGKSENFAFSGGVQGFVQYMNRSKSVLHPH
IFYATGEKDGMTVEVAMQWNDSYAETVQCFTNNIPQRDGGSHLTGLRTAMTRTLNQYIEQ
NEFAKKAKIDTTGDDMREGLTCVLSVKVPEPKFSSQTKDKLVSSEVQPVVSEIVSQKLTE
FLLENPNDAKIIVNKIIDAARARDAARKAREMTRRKGVLDGMGLPGKLADCQEKDPALSE
IYLVEGDSAGGSAKQGRDRKFQAILPLKGKILNVEKARFDKLISSQEIATLITALGTGIG
KDEYNADKLRYHRIIIMTDADVDGSHIRTLLLTFFYRQMPELVERGHIYIAQPPLYKVKH
GKTERYLKDEHELKAFLLAEATKETRLITAEHGGTEISGAALENIAKSYLLAEAVIERMS
RVIDGAVMHTLMDIAPISLATQTDAEQSAKILIAAIQDPAVNIEVDYSIENETYSLKINR
RHHGNIQVTRLDADFVQSGDYAQIRETSQVLQGLLAPGAKAVRGEKFQPVSSFKEALEWL
LNEVKRGLAIQRYKGLGEMNPSQLWETTMDPTVRRLMRVQIEDAISADEIFVTLMGDQVE
PRRAFIETNALGVRNLDV
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaatatgattcgaatagtatccgcatattaaaagggttggatgcggtacgt
aaacgccctggtatgtatataggtgatacgtcagacggtactggtttgcatcatatggta
tttgaagtattggataacgctattgatgaagcattagggggctattgcgatgatattaaa
gtcgtcattcatgctgataattcagtatccgttaccgataatggacgtggcattcctgta
gatatcaaacaggatgacgaattcaagcgttcagcagctgaaatcgtcatgaccgaattg
catgcgggcggaaaatttgatcagaactcatataaagtttctggcggtttgcatggagtc
ggtgtttcagtagtcaatgccttgtcagattggctgaaattacgtatctggaaaaatggc
tatagttatcagatggaattccgtcagggggaagcagtcagtcctttagctgaaacagga
aaatccgatcgtcatggtaccgaagtgcatttttttgcatcgaaagaaacgttcggcctc
attgagtttcattacgatattttggcgaaacgcatacgtgaactgtcatttctgaataac
ggggtaaagattgagctaattgatcagcgtgatggcaagagcgagaacttcgctttctcg
ggcggcgttcagggattcgtacagtacatgaaccgttccaaatcagttttgcatcctcat
atattttatgcgacgggtgaaaaagacgggatgacggttgaagtcgctatgcaatggaat
gattcttatgccgaaactgtgcagtgctttaccaataacatcccgcaacgtgatggtggt
agtcatcttacaggtttgcgaactgccatgacgcgtacgctaaaccagtatattgaacaa
aatgaatttgcaaaaaaagccaaaatagatactactggcgatgatatgcgtgaaggcttg
acttgcgtattgtcggtgaaagtaccggaaccgaaattttcttcgcaaaccaaagataag
ttggtttcatccgaagttcagccagtcgtatcggaaattgtcagccagaaacttaccgaa
tttctattggaaaatcccaacgatgccaagattattgtcaacaagattatcgacgccgct
cgcgcacgcgatgccgcgcgtaaagcgcgggaaatgaccagacgtaaaggcgtattggat
ggcatgggattgccaggaaaactggcggattgccaggaaaaagaccctgctctttcggaa
atctatctggtcgagggtgattccgcaggcggctcagccaaacaagggcgcgatcgtaag
tttcaagctatcctgccgctcaaaggcaagatactgaacgtggaaaaggcgcggtttgac
aagctgatatccagccaggaaatagcgacactgattaccgcattgggcacaggtatcggt
aaagatgaatataacgcggacaaattacgttatcaccgtatcattatcatgactgatgcg
gacgtagacggctcgcacattcgtaccttgcttctcacgtttttctatcgtcagatgccg
gaattggtggagcggggacatatttacattgcgcaaccgcctttgtacaaggtaaaacac
ggtaaaaccgaacgctatttaaaagacgagcatgagctgaaagcgttcttgttggcggaa
gcgaccaaagaaacaagattgattaccgcagagcatggcggtacagagatcagcggcgcg
gcattggaaaacattgccaaatcctatttgctggccgaagcggtgatagaacgcatgagt
cgtgtcattgacggtgccgtcatgcatacgctaatggatatcgcgcctatatcgctggct
actcagaccgatgcggaacaatctgccaaaatattaatagcggcaatccaggatccggcg
gttaacatagaagtcgattacagtatcgaaaacgaaacctattcgctcaagattaatcgg
cgtcatcacggcaatatacaagttaccaggttggatgccgattttgtacaaagcggagat
tacgcacagatccgtgaaaccagtcaggttttgcaaggattattggcccccggggccaaa
gctgtacggggagaaaaattccagccggtatccagcttcaaagaagcgctggaatggttg
cttaatgaagtcaagcgcggattggcgatacagcgttataaaggtttgggtgaaatgaat
ccaagccaattgtgggaaaccacgatggatccgacagtgcgccgtttaatgcgggttcaa
attgaagatgccattagcgcagatgaaattttcgtaactcttatgggtgaccaagtcgaa
ccacgccgcgcatttattgaaaccaatgcgctaggtgtcagaaacttggatgtataa
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