Sulfuriferula sp. AH1: CAP31_00650
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Entry
CAP31_00650 CDS
T04857
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sulf
Sulfuriferula sp. AH1
Brite
KEGG Orthology (KO) [BR:
sulf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sulf03032
]
CAP31_00650
03400 DNA repair and recombination proteins [BR:
sulf03400
]
CAP31_00650
Enzymes [BR:
sulf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CAP31_00650
DNA replication proteins [BR:
sulf03032
]
Prokaryotic type
DNA Topoisomerases
CAP31_00650
DNA repair and recombination proteins [BR:
sulf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CAP31_00650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ARU30328
UniProt:
A0A1Y0G426
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Position
113051..115639
Genome browser
AA seq
862 aa
AA seq
DB search
MSALVIVESPSKAKTLKKYLGAEYEILASYGHVRDLVPKTGAVDTDSDFAMKYQLIERNE
RHVDAILRAAKKADRILLATDPDREGEAIAWHLAEILREKKITPKKPIARIEFHEITQSA
IQHAVDNPREIAMPLVDAQQARRALDYLVGFNLSPLLWRKISPGLSAGRVQSPALRLIVE
RELEIEKFVAREYWSIHLDSHKANQPFSARLIQFNGEKLEQFSVPTADAQQSILDQLAAH
KTGTVSRVEKKRKSRNAAAPFTTSTLQQEAVRKLGMTTDRAMRTAQQLYEGIDTGSGAVG
LITYMRTDSVNLAREAIDDIRHYIQRNFDAGYLPAAPVYFRNKSKNAQEAHEAIRPTAIA
RTPDSVRKFLTIDQARLYEMIWKRTLACQMTPAQFDTVSLDIAVGSPANLFRATGQTLVF
PGFIAVYQENQDDAAEEDDAKLPVLVEGETIPVDKLSGEQHFTQPPPRYTEASLVKTLEE
YGIGRPSTYASIISTLQDREYVVLDKKRFMPTPTGRLVNCFLTTHFTHYVDYDFTAKLED
KLDDVSNGELKYLPLLHEFWDDFAGTLAAKADVERGCPIEDEVCPKCGGKLFLQASKRGL
FIGCSGYPACDYTRPLHGGNEEGPVVLGNDPASGEDILLLNGRYGWYVQVGATPEDKKIK
PRRASWPKTLPIETADLPTALRLLSLPREVGAHPDTGLTIVANIGRFGPYLQHDGKFKSI
PKDDDVYTIALPRALEVLLMERAPRGGAPAGKPLGNHPEDGKTVTLNEGRYGWYVKHGAV
NATLPKDMTPDTVTLEQALPLLAERASKGKPARKKIAAKAKPASTAKKATAVKKPAATKK
PAVKKATATKTEKKPVKPKTET
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcactcgttattgtagaatcgccttccaaggcaaaaaccctgaaaaaatacctc
ggcgcggagtacgaaatcctcgccagctacggtcacgtgcgcgatctggtgcccaaaacc
ggcgcagtcgataccgacagcgatttcgcgatgaaataccagctcatcgagcgcaatgaa
cgccatgtcgatgccattctgcgcgcggcgaaaaaagccgaccgcatcctgctcgcaact
gacccggatcgcgaaggcgaggccattgcctggcatttggcggagattttgcgagaaaag
aaaatcaccccgaaaaagccaatcgcccgcatcgaatttcatgaaatcacccagagcgcg
atccagcatgccgtagacaacccgcgcgaaatcgcgatgccgctggtcgatgcgcagcag
gcccgccgtgcgctggattatctggtcgggttcaatctgtcgccgctgctgtggcgcaag
atcagcccgggtctgtccgccggtcgcgtgcaaagcccggcgctgcgcctgatcgtcgaa
cgcgaactggaaatcgaaaagttcgtcgcccgtgaatactggagcatccatctcgacagc
cacaaggccaatcagcctttttcagcacggctgatacagttcaacggtgagaagctcgag
cagttcagcgtccccaccgccgacgcgcaacagagcatactcgaccagttggccgcacat
aaaaccggcacagtcagccgcgtcgaaaagaagcgcaaatcgcgtaacgccgcagcaccg
ttcaccacttcaacactgcaacaggaagccgtgcgcaagctgggcatgaccaccgaccgc
gcgatgcgtactgcgcagcaactgtacgaaggtatcgacaccggcagcggcgcagtgggc
ctgatcacctatatgcgtaccgattcggtcaatctggcacgcgaagcgatcgacgacatc
cgccactacatccagaggaatttcgacgccggctatctgcccgcggcacccgtgtatttc
cgcaacaaatcgaaaaacgctcaggaagcacacgaagccatacgtcccacagcgatcgcg
cgcaccccggattccgtgcgcaaattccttaccatcgatcaggcccggctgtatgaaatg
atctggaagcgcacgctggcctgccagatgacgccggcgcaattcgataccgtcagtctg
gacatcgcggtcggcagcccggccaatttgttccgcgctaccggacaaacgctggtattc
cccggctttatcgccgtgtatcaggaaaaccaggacgatgccgcagaggaagacgatgcc
aagttgccggttctggtcgaaggtgaaaccatcccggtggacaagctgtcgggcgaacag
cactttacccagccgccgccgcgctataccgaggccagtctggtcaagacgctggaagaa
tacggcatcgggcggccatcgacctacgccagcatcatttccacattgcaggaccgcgaa
tacgtggtgctggataagaaacgcttcatgcccacgccgaccggccggctggtgaactgc
ttcctcaccacgcatttcacccattacgtcgattacgacttcaccgccaagctcgaggac
aagctggatgacgtatccaacggcgaactgaaatacctgcccttgctgcatgaattctgg
gatgatttcgccggtaccctggcggccaaagccgatgtggagcgcggctgtccaatcgag
gatgaagtctgccccaaatgcggcggcaagctgtttctgcaggccagcaaacgcggactg
tttatcggctgctccggctatcctgcctgcgattacacacgtccgctgcatggcggtaac
gaagagggtccggtcgtgctcggcaacgacccggctagcggggaagacatcctgctgctc
aatggccgctacggctggtatgttcaggtcggcgccacaccggaagacaaaaaaatcaaa
ccccggcgcgcctcatggccgaagaccctgcccatcgagactgccgacctgccaaccgca
ttaaggctgctgtcacttccgagagaagtgggcgctcaccctgacaccggcttaacgatc
gtggccaacatcggccgctttggcccttacctgcaacacgacggcaaattcaagtccatt
cccaaagacgacgatgtttacaccatcgccttgccgcgtgccctggaagtcttgttaatg
gagcgcgcccctcgcggcggtgcccctgcgggcaagccgctgggcaatcatccggaggat
ggcaaaaccgttactctgaatgaaggccgctacggctggtacgtcaaacacggcgctgtc
aatgctacgctccccaaggacatgacaccggatacggtaactctggagcaggcgttaccg
ctgctcgcggaacgcgccagcaaaggcaagccggctcgcaaaaaaatagcggccaaagcc
aaaccggcaagcacggccaagaaagcgacagcggtgaaaaagcctgcagcaaccaaaaaa
ccggcagtcaaaaaagccacggcgaccaaaaccgaaaaaaaacccgtcaaacccaaaacg
gaaacctga
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