Sulfuriferula sp. AH1: CAP31_04145
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Entry
CAP31_04145 CDS
T04857
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sulf
Sulfuriferula sp. AH1
Pathway
sulf03420
Nucleotide excision repair
sulf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sulf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CAP31_04145
03430 Mismatch repair
CAP31_04145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sulf03400
]
CAP31_04145
Enzymes [BR:
sulf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CAP31_04145
DNA repair and recombination proteins [BR:
sulf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CAP31_04145
MMR (mismatch excision repair)
Other MMR factors
CAP31_04145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ARU30950
LinkDB
All DBs
Position
complement(782874..785030)
Genome browser
AA seq
718 aa
AA seq
DB search
MSSLLDGLNPEQLAAVTLPHQSALILAGAGSGKTRVLTTRIAWLLQTGQVSPLGILAVTF
TNKAAKEMQTRLSSMLPINTRGMWIGTFHGLANRLLRTHHHEAGLPQLFQILDSADQLSA
IKRLLKSMNVDTEKFEPKKVQNFINGNKDAGLRAHHVDVYDPYTRRLVEFYSAYDEQCNR
EGVVDFAELLLRSEELLARNEALRRHYQERFRYILVDEFQDTNRLQYRWLKHFAGADSAL
MAVGDDDQSIYAFRGAHTGNMNEFQRDYAHDNIIKLEQNYRSHGNILDAANALISQNPAR
LGKNLWTAADQGELIRVYLAYNDQEEARFIAEESQALHREGIALNDMAVLYRSNAQSRVL
EHALFSAGIPYKVYGGLRFFERQEIKHALAYLRLLANPDDDGAFTRVVNFPTRGIGARSL
EQLIDAAQQSSSSLWHAASTKAGDAPGSKGLPGFVQLIRSMQEATLGVTLPEAIEHILQA
SGLMAHYLSEKDGQDRVDNLNELINAATVFINDPDALADAADNGGLMASFLAHAALEAGV
HQAGEGHDALQLMTVHAAKGLEFHAVFLTGLVEGLFPSEQSIGEQSGIEEERRLMYVAIT
RARRRLYISHAQSRMLHGQTRYGIPSRFLGEIPMELLKPINKGYAPDADVYAAPVSRSTQ
QHSSSPWRMGMSVRHAKFGVGVVINVEGQGPDTRVQINFGGAHGVKWLALEYAKLEAA
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcactactcgacggattaaatccggaacaactcgccgcggtcaccctgccgcac
caatcggccctgatcctggcgggtgcaggcagcggcaagacccgcgtgctcaccacgcgc
atcgcttggctgctgcagaccgggcaggtatcaccgctgggcatcctcgccgtcaccttt
accaacaaggccgccaaggaaatgcagacgcgcctgagcagcatgctgccgatcaacacc
cgcggcatgtggataggcaccttccacgggctggcgaaccggctgctgcgcacccatcac
catgaggccgggctgccgcaactgttccagatcctcgacagcgccgaccagctgtcggcg
atcaagcgcctgctcaaatccatgaacgtggacaccgagaaattcgagccgaagaaagtg
cagaatttcatcaacggcaacaaggacgccggcctgcgcgcccatcatgtcgacgtctac
gatccatacacgcgccgtctggtcgaattctattcggcctacgacgagcagtgcaaccgc
gaaggcgtagtggactttgccgaactgctgctgcgcagcgaggaattgctggcgcgcaac
gaagccctgcgccgtcattatcaggagcgattccgctacatactggtggacgaattccag
gacaccaaccgcctgcaataccgctggctcaagcacttcgccggcgcggattcggcgctg
atggcagtgggcgacgacgaccagtccatctacgcgttccgtggcgcgcacaccggcaac
atgaacgaattccagcgcgattacgcccacgacaacatcatcaagctggaacagaattac
cgcagccacggcaacatcctcgacgccgccaatgcgctgatcagccagaacccggcgcgg
ctgggcaagaacctgtggaccgccgccgatcagggcgagctgatccgcgtgtatctggcc
tacaacgatcaggaagaagcgcgcttcatcgccgaagaatcgcaggcgctgcaccgcgaa
ggcatcgcgctcaacgacatggccgtgctctaccgctccaacgcgcagtcgcgggtgctg
gagcacgccctgttcagcgccggcatcccgtacaaggtctacggcggcctgcgcttcttc
gagcgccaggagatcaagcacgcgctggcctacctgcgcctgctcgccaaccccgacgac
gacggcgcctttacccgcgtagtgaatttccccacccgcggcatcggcgcgcgcagtctg
gagcagctcatcgacgccgcgcagcaaagttcatccagcctgtggcatgccgccagcacc
aaggccggcgatgcgcccggcagcaaaggcctgcccggtttcgtccagctcattcgcagc
atgcaggaagccaccctcggcgtcaccctgcccgaggccatcgagcacatcctgcaagcc
agcgggctgatggcgcattacctgagcgaaaaagacggccaggaccgcgtcgacaacctc
aacgagctgatcaacgccgccaccgtgttcatcaacgaccccgacgcgctggccgacgct
gccgacaacggcgggctgatggccagcttcctcgctcatgccgcgctcgaagccggcgtg
catcaggccggcgaaggccacgacgcgctgcagctgatgaccgtgcatgccgccaagggg
ctggagtttcacgcggtattcctcaccgggctggtagaaggcctgttccccagcgagcag
tcgatcggcgagcagagcggcatcgaggaagaacgccgcctgatgtacgtcgccatcacc
cgcgcgcgccgccgcctgtacatcagccacgcacaaagccgcatgctgcacggccagacc
cgctacggcatcccgtcgcgcttcctcggcgagatcccgatggaactgctgaaaccgatc
aacaagggctatgcgcccgacgccgacgtctacgccgcaccggtctcccgctctacccag
cagcacagcagctcgccctggcgcatgggcatgagcgtgcgccacgccaaattcggcgtc
ggcgtggtgatcaacgtcgaaggccagggccccgacacccgcgtgcaaatcaacttcggc
ggcgcgcatggggtaaaatggctggcactggaatacgccaaactcgaagccgcctga
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