Sulfuriferula sp. AH1: CAP31_05095
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Entry
CAP31_05095 CDS
T04857
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sulf
Sulfuriferula sp. AH1
Brite
KEGG Orthology (KO) [BR:
sulf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sulf03016
]
CAP31_05095
Enzymes [BR:
sulf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
CAP31_05095
Transfer RNA biogenesis [BR:
sulf03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
CAP31_05095
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ARU31116
UniProt:
A0A1Y0G6D7
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All DBs
Position
979063..979629
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AA seq
188 aa
AA seq
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MMATPGNADTAGRNTARVFFALWPDPDMRTALAGMGKHMHAQCGGRRTRAESIHITLAFV
GEVGIERIAELQALAAQLQCAAFNFELARTGWWRHNHIAWVAPETVPQGLIDLASALQSR
LKGAGFKVDERAYLPHVTLLRKADCPWAQAAMKPLRWTARNFVLVKSVTGENGSAYEIIG
RWPLVSAL
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgatggccacgcctgggaatgcggataccgctggccgcaatacagcgcgcgtatttttt
gcgctatggcccgatccggatatgcgcacggcactcgccgggatgggcaaacatatgcat
gcacaatgcggggggcggcgtacacgcgccgagtctatccacattacgctggcgtttgtg
ggagaggtggggattgagcgcattgccgaattacaggcattagctgcgcagttgcagtgc
gctgcattcaatttcgagctggcgcgcaccggctggtggcggcataaccatatcgcctgg
gtggcgccggaaacggtcccgcaggggttgattgatctggcgagcgcattgcagtcgcgg
ttaaagggtgcaggtttcaaagtcgatgagcgagcatatttgccgcatgtgaccttgctc
aggaaagctgattgcccttgggcgcaggcagcgatgaagccattacgctggacggcacgg
aatttcgtactggtgaaatcggtaacgggtgagaatggatcggcctatgagatcataggc
cgatggcctttggtgtcagccttatag
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