Sulfuriferula sp. AH1: CAP31_08505
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Entry
CAP31_08505 CDS
T04857
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
sulf
Sulfuriferula sp. AH1
Pathway
sulf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sulf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CAP31_08505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sulf03400
]
CAP31_08505
DNA repair and recombination proteins [BR:
sulf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CAP31_08505
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CAP31_08505
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
AAA_22
Microtub_bd
DUF87
Motif
Other DBs
NCBI-ProteinID:
ARU31719
LinkDB
All DBs
Position
complement(1668392..1670428)
Genome browser
AA seq
678 aa
AA seq
DB search
MIVTFPNSPFRLHQPFLPAGDQPQAIEKLVEGINDGLAFQTLLGVTGSGKTYTMAHVIAQ
LGRPAMIMAPNKTLAAQLYAEMREFFPENSVEYFVSYYDYYQPEAYVPARDLFIEKDSSI
NEHIEQMRLSATKALLERKDSIIVATVSAIYGIGDPGDYHQMILHLRQGEKLSQRDAIQR
LIAMQYDRNEYEFKRGVFRVRGDVLDIFPAESAEHAVRISLFDDEVESIRLFDPLTGHLL
QKLPRFTVYPSSHYVTPRSTTLRAIEAIKLELREQLEEYYRENKLVEAQRLEQRTRFDLE
MMNELGFCKGIENYSRHLSGRKPGEPPPTLIDYLPPQALMIIDESHVTIPQIGGMYKGDR
ARKENLVNYGFRLPSAMDNRPLRFDEFERIMRQTVFVSATPAEYEQQHQGQVVEQVVRPT
GLVDPEIEVRPVATQVDDVLSEITKRVAVNERVLVTTLTKRMSEDLTDYLSEHGVKVRYL
HSDVDTVERVEIIRDLRLGVFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLI
QTIGRAARNLHGRAILYADRITNSMRRAMDETERRRHKQVAYNLEHGITPRGVVKGIKDI
IEGAYDMESAQANHKAARKLASYHAKDEKTLTRELKQVEKDMLTAAKNLEFERAAELRDE
LKHLKAVLFGADGTHEGD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
gtgattgtcacttttcccaatagtccttttcgattgcatcaaccttttttaccggcaggc
gatcagccgcaggccatagagaagctggtagaggggatcaacgacggactggcgtttcag
actttgctcggcgtgaccggctccggcaagacctacacgatggcgcatgtcatcgcgcaa
ttggggcggccggcgatgatcatggcgccgaacaagactctggcagcgcagctgtatgcg
gaaatgcgcgagttttttccggagaattcggtcgagtatttcgtttcctactacgattac
tatcagcccgaggcatatgtgccagcgcgtgacctgttcatcgagaaggattccagcatc
aacgagcatatcgagcagatgcgcctgtcggcaaccaaggcgctgctggagcgcaaggac
agcatcatcgtggcgacggtttccgcgatttacggtatcggcgatccgggcgattatcat
cagatgattttgcatctgcgccagggcgagaaactgtcgcagcgcgatgcgatccagcgg
ttgattgcgatgcaatacgacaggaacgaatacgaattcaaacgcggcgtgtttcgcgtg
cgcggcgacgtactggatatttttccggcggagagtgccgaacatgcggtgcgcatttcg
ctgtttgacgacgaggtggaaagcatccgcctgttcgatccgcttaccggccatttgttg
cagaaactgccacggttcaccgtgtacccgtccagccattatgtcaccccgcgcagcacc
accttgcgggcgatcgaggcgatcaagctcgaattgcgtgaacaactggaagaatattac
cgcgagaacaagctggtcgaagcgcaacggctggagcagcgcacgcgattcgatctggag
atgatgaacgagctggggttctgcaaaggtattgaaaattactcgcggcatctgtccggg
cgcaaaccgggcgagccgccgccgacgctgatcgattatctgccaccgcaggcgctgatg
atcatcgacgaatcgcacgtcaccatcccgcagatcggcggcatgtacaagggtgaccgt
gcacgcaaggaaaatctggtcaattacggctttcgcctgccgtcggcgatggataaccgc
ccgctgcgtttcgatgagttcgagcgcatcatgcgccagacggtgttcgtatcggcgacg
ccggccgagtatgaacagcagcatcagggacaggtggtggagcaggtagtgcgcccgacc
ggtctggtcgatcccgagatcgaagtgcggccggtagcgactcaggtggatgacgtgctc
tccgaaatcaccaaacgcgtcgcggttaacgagcgcgtgctggtgaccacgctgaccaag
cgcatgtcggaagacctcaccgattacttgtcggaacatggggtgaaggtacgctatctg
cattccgatgtggatacggtggagcgcgtcgagatcatccgcgatctgcggctgggcgtg
tttgacgtgctggttggcatcaatctgctgcgcgaggggctggatatccctgaagtgtcg
ctggtcgcgatcctggatgcggacaaggagggtttcctgcgttcggaacgctcgctgatc
cagaccatcggccgggcggcgcgcaacttgcatggccgtgcgatcctgtacgctgaccgc
attaccaactcgatgcggcgggcgatggatgagaccgaacgccgccgccataagcaagtg
gcatataaccttgagcatggcatcacgccgcgcggggtggtgaaaggcatcaaggatatc
atcgagggcgcatatgatatggaaagcgcacaagccaaccataaggcggcgcgaaagctg
gcgagctatcatgccaaggatgagaagacgctgacccgcgaattgaagcaggtggaaaaa
gacatgctcactgccgccaaaaatctggagttcgagcgcgcagccgaattgcgcgatgag
ctgaagcatctgaaagccgtgttgtttggcgcagacgggacgcatgaaggcgactaa
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