Sulfuriferula sp. AH1: CAP31_10465
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Entry
CAP31_10465 CDS
T04857
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
sulf
Sulfuriferula sp. AH1
Brite
KEGG Orthology (KO) [BR:
sulf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sulf03019
]
CAP31_10465
Enzymes [BR:
sulf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CAP31_10465
Messenger RNA biogenesis [BR:
sulf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CAP31_10465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
DEAD
HA2_C
AAA_22
AAA_19
HA2_N
FtsK_SpoIIIE
T2SSE
nSTAND3
ResIII
HTH_Tnp_1
AAA_30
SRP54
NACHT
SLFN-g3_helicase
EACC1
PhoH
Motif
Other DBs
NCBI-ProteinID:
ARU32056
UniProt:
A0A1Y0G962
LinkDB
All DBs
Position
complement(2065579..2069307)
Genome browser
AA seq
1242 aa
AA seq
DB search
MTETTTPPRYWQPSVINYPEALPVSARHQEIIAAIRQHQAVIVCGATGSGKTTQLPKICL
QAGRGQLGRIACTQPRRIAARTVASRVAQELGTRVGEGVGYKVRFSDQVRADSVIKVLTD
GMLLAETTGNRDLREYDTIIIDEAHERSLNIDFLLGYLRQLMVRRPELKIIITSATIDAE
RFSRHFNQAPVIEVSGRTYPVEIRYRPVLAPERAEEGRKARETDEERITQAILDATDELV
RLGEGDILVFLPGEREIRDTAEALRKHHPPHTEILPLFARLSVKEQERIFQPTNARRIVL
ATNVAETSLTVPGIRYVIDPGYARILRYSARNKVDQLFTEPVSQASANQRSGRCGRVAAG
VCIRLYAEQEYAARPEYTDPEILRTSLAGVILRMSALRLGQPADFPFLDAPAPRLIADGY
QLLEELNAIDATRRLTAIGKQLARLPLDPKIGRVLLAAQQYGCLREALILCAALSVQDPR
ERPAAQAGAADDRHRAFADETSDFAGLLKLWEFYDEALRHKKSNRKLQETCREHFLNPTR
LREWREVHGQLAATASELGLAENAGPANYEAIHKALLTGFLGNIGVKMDEGGFQGARGIR
FFVHPGSALAKKPPKWVMAAELIETTRLYARTAAKIEPEWLESIAAHLLKRNYFDPHWQK
KTAQVSAFEQVQLFGLIIIPRRSVHYGAIDPVESRRIFIRSALVAGEFDTRAAFSAHNQQ
LLNEVSALEHKARRQDVLVDEERLFAFFDARIPADIVNGSGFERWRREAERANPRLLYLS
RDDVMRHDAGSITEDWFPQTLQWDGLSLPLQYRFEPGHVLDGVTVTVPLALLNALPAWRF
DWLVPGMLREKLGWYVKALPKHLRRVFVPVPDTVTAAMSALTANSALTEALAAWLAKRSG
LKIAASDWHDAPPLHLQMNFRVVDERGQELAMGRDLQALRQQLGEAAQLTFSAPDNTFEQ
TGFKRWDFGDVPESLPFTRAGQSVTGYPAIIDEQDSVALRLLDTPAAAERAHRHGVVRLC
RLHLIEQFRYLEKNIPDFTRLALAYRQFGDADDLREALLAAIAERACLGDDPLPRTAAQF
DAQLVRARARIKPVADALTRIIAQVLTLYQQLAPRLKTPWPHVTKDVAGQLHQLVYPGFV
TTTPWLRLQHLPRYLQGVQQRLDKLPDRLAQDQQHTATLAALTAQWQARELKHRKAGVDD
PQLQEFRWQLEELRISLFAQSLKTPQPVSVKRLQKMWESVQG
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaccactactccgccgcgttactggcaaccttccgtaatcaactaccccgaa
gctctacccgtatcagcacgacatcaggaaatcatcgcagccatacggcagcatcaggct
gtcatcgtctgcggtgcgaccggttccggcaaaaccacgcagctgccgaaaatctgtctg
caagccgggcgcggtcagcttgggcgcatagcctgtactcagccgcggcgtatcgcagcg
cgcactgtggcgtcgcgcgtggcgcaggagctgggcacgcgggtgggcgaaggcgtcggc
tacaaggtgcgtttcagcgatcaggtgcgcgccgacagtgtgatcaaggtgctcaccgac
ggcatgctgctggcggaaaccaccggcaaccgcgatttgcgcgaatacgacaccatcatc
attgacgaggcgcatgagcgcagtctgaatatcgattttctgctgggttatctgcgccag
ctcatggtgcgcaggcccgaactgaaaatcatcattacctccgcgaccattgacgccgag
cgtttctccaggcatttcaatcaggcgccggtcatcgaagtgtcgggacggacttacccg
gtggaaatccgttatcgtcctgtcctcgcacccgagcgggccgaggaggggcggaaagct
cgcgaaaccgatgaggagcggatcacgcaagcgatactggacgcaacggatgaactggtg
cggctgggcgagggcgatattctggtattcctgcctggagagcgcgaaattcgcgatacc
gccgaagccttgcgcaaacaccatccgccgcataccgagatactgccgctgtttgcgcgg
ctgtcggtcaaggagcaggaacgcatttttcagccgaccaacgcccgccgtatcgtgctg
gcgaccaacgtcgcggaaacttcgctgaccgtgccggggatacgctatgtcatcgacccc
ggttatgcgcggatattgcgttactcggcacgcaacaaggtcgatcagctgttcaccgag
ccggtgtcgcaggcttccgccaatcagcgttccggccgctgcggccgggtcgcggccggc
gtatgcatccgtttgtatgccgaacaggaatatgcggcacgtccggaatataccgatccg
gaaattctgcgcacctcgctggccggcgtgatcttgcgcatgtcggcactgcggctgggg
cagcctgccgatttcccgtttctggatgcgccagcgcctcgcctgattgcggacggctat
caattgctggaagagttgaacgcgatagatgccacccggcgtttgacggcaataggcaag
cagctggcgcgcttgccgctggatccgaaaatcgggcgggtgttgctggcggcgcagcag
tacggctgtttgcgcgaggcattgatcctgtgcgcggcgttgtcggtgcaggatccgcgc
gagcgtccggcagcgcaggcaggtgcagcggatgaccgccatcgcgcgtttgccgacgag
acttccgatttcgccggcctgcttaaattatgggaattctatgacgaagcgcttcggcat
aaaaaatccaaccgcaagttgcaggaaacctgccgcgagcattttctcaatcctacccgc
ttaagggagtggcgcgaggtgcatgggcaactggcggccaccgcatccgaactcggtctg
gccgagaatgccgggccggccaattacgaagccattcataaggccctgctgaccggcttt
ctcggcaatatcggcgtgaaaatggacgaagggggtttccagggtgcccgcggcatcagg
ttttttgtgcaccctggttcggcactggcgaagaagccgccgaaatgggtaatggcggcc
gagctgatcgagaccacgcgactgtatgcgcgcacggcggcaaaaatagagccggaatgg
ctggaaagcatcgccgcgcacctgctgaaacgcaattatttcgacccgcactggcagaag
aaaactgcgcaggtaagcgcctttgagcaagtgcaactgttcggcctgattattattccg
cgccgcagcgtgcattacggcgccatcgatccggtcgagagccgccgtattttcattcgt
tccgcactggtggcgggcgaattcgacacccgtgcggcattttccgcgcataaccagcaa
ttgctcaacgaagtcagtgcgctggagcacaaggcgcggcgccaggatgtgctggtggac
gaagaacggctgttcgcgttcttcgatgcgcgcataccggcggatatcgtcaacggcagc
ggtttcgagcgctggaggcgcgaggcggagcgggcaaacccgcgcctgctgtatttaagc
cgtgacgatgtgatgcggcatgacgccggtagcattaccgaagactggtttccgcagacc
ctgcagtgggacggtctgagcctgccgctgcaataccgtttcgagccggggcatgtgctg
gacggggtgacggtaacggtgccgctggcattgctgaacgccttgcctgcatggcgtttc
gactggctggtgccgggtatgctgcgggaaaagctgggctggtatgtgaaggcgctgccc
aagcatttgcgccgtgtgttcgtgccggtgccggatacggtcactgccgccatgtcggca
ctgactgcgaactcggcattgaccgaagcgctggccgcctggctggcgaaacgcagcggt
ctgaaaattgcggccagtgactggcatgatgcaccgccgctgcatttgcagatgaatttc
cgtgtagtcgatgagcgtggacaggaactggcgatgggccgggatttgcaggctttgcgc
cagcaactgggcgaagcggcgcagctgaccttcagtgcgccggataacacctttgagcaa
actggattcaagcgctgggatttcggcgatgtgccggaatcgttgccgtttacccgcgcc
ggtcagtccgtcaccggttatcctgcgattatcgacgagcaggacagcgtggctttgcgc
ctgctggatacacctgccgcggcggaacgcgcccaccggcacggggtggtgcggctgtgc
cggttgcatctgatcgaacagttcaggtatctggaaaagaacatccccgattttacgcgg
ctggcattggcctatcggcagttcggcgatgccgacgatctgcgcgaagccctgcttgct
gccatcgccgaacgagcgtgcctgggtgatgatccgttgccgcgtaccgctgcccaattc
gatgcgcaactcgtcagggcgcgggcgcgtatcaaaccggttgccgatgcgttgacgcgt
atcatcgcgcaggtgctgacgctgtatcaacagttggcgcccaggctcaaaacgccatgg
ccgcatgtaaccaaagacgtggcagggcaattgcatcagctggtttatcctgggtttgtc
acgacgacgccgtggttgcgcctgcagcatctgccgcgttatctgcaaggcgtgcagcag
cgtctggacaagttgccggaccggttggcgcaggatcagcagcatacggcgacgctggct
gcattgaccgcgcaatggcaggcgcgtgagctgaaacatcgcaaggcaggtgtggacgat
ccgcaactgcaggagtttcgctggcagctggaagaactgcgcatttcgctgttcgcgcaa
agcctgaaaacgccgcagccagtctcagtcaagcgcctgcagaaaatgtgggagtcggtg
cagggatag
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