Sulfuriferula sp. AH1: CAP31_12180
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Entry
CAP31_12180 CDS
T04857
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sulf
Sulfuriferula sp. AH1
Pathway
sulf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sulf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CAP31_12180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sulf03021
]
CAP31_12180
03400 DNA repair and recombination proteins [BR:
sulf03400
]
CAP31_12180
Enzymes [BR:
sulf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CAP31_12180
Transcription machinery [BR:
sulf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CAP31_12180
DNA repair and recombination proteins [BR:
sulf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CAP31_12180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
ARU32369
UniProt:
A0A1Y0G9P0
LinkDB
All DBs
Position
complement(2409094..2413290)
Genome browser
AA seq
1398 aa
AA seq
DB search
MKALLDLFKQVTQEEEFDAIKIGLASPEKIRTWSYGEVKKPETINYRTFKPERDGLFCAK
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTLSKVRRERMGHIELASPVAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAYVVTDPGMTPLNRSQLLTEDDYLAKVEEYGDEFKASM
GAEGVRELLKSIDIVTEVETIRADMAKTGSDTKIKKLAKRLKVIEAFQKSGIKPEWMVLE
VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQ
EAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQ
LRLHQCGLPKKMALELFKPFIFHKLEVMGLATTIKAAKRMVETEEPVVWDILEDVIREHP
VMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEA
RTLMLASNNVLSPANGEPIIVPSQDIVLGLYYMTREKVNAVGEGMMFADVDEVSRAYESR
QAELNAKVTVRIKEAYYDEQGERAEKLTRYETTVGRALLSEILPIGLSFTHVNKILKKKE
ISKLINVSFRRCGLRETVILADKLMYTGFTYATRGGMSICVDDMLVPTQKHDIISASEKE
VQEIEAQYTSGLVTQGERYNKVVDIWGRAGDQVAKAMMTQLGSEPVVTRDGVATTQESFN
AIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVTQDLVVIEDDCGTREGLVLKALVEGGEVIEPLRERVL
GRVTALDLIHPETGETVIEAGVMLDENMVEKIEALDIDEVKVRTALTCDTRYGLCAKCYG
RDLGRGYLVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRSAAASQLESKSAGVATY
STAMRYVTSAKGEAIAIARSGEIIIIGDNGRERERHKVPYGATLTVKDGDKIKAGQVMAM
WDPHTRPIITEYAGRVRFENVEEGATVAKQIDDVTGLSTLVVIDPKRRVGAASKGLRPQV
KLLDENGMEIKVAATQMPVNITFQIGSIITVKDGQEVGVGEVLARIPQESSKTRDITGGL
PRVAELFEARSPKDAGVLAPVTGTVSFGKDTKGKQRLVITDLDGMAHEYLIPKEKHVTAH
DGQVVNKGEMIVDGPVDPHDILALKGVEALSRYITDEVQDVYRLQGVKINDKHIEVIVRQ
MLRRVSVVDAGDTKFIQGEQVERAELLIENERVLAEGKEPATFDYVLLGITKASLSTDSF
ISAASFQETTRVLTEAAIMGKKDELRGLKENVIVGRLIPAGTGLAYHNTRRMQKLGLDMA
TESDIFEAPEAVDSEQSA
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcattgctcgacttatttaaacaagtcactcaagaagaagaatttgacgcgatc
aagattggtcttgcgtcgccggagaaaatccgtacctggtcttatggcgaagtcaaaaag
ccggagaccatcaactatcgcacctttaaaccggagcgcgatggtttgttctgtgccaag
atatttggtccggtgaaagactacgaatgcttgtgcggcaagtacaagcgcctgaagcac
cgtggcgtaatctgcgaaaaatgtggtgtagaagtaaccttgtcgaaggtgcgccgtgaa
cgcatgggccatattgagctggccagcccggtcgcgcacatctggttcctcaagtcgttg
ccttcgcgtttgggtatggtgctggatatgacattgcgcgatattgaacgcgtactgtat
ttcgaggcatatgtggtgaccgacccaggtatgacgccattgaatcgttcacaattgctg
actgaggatgattacctcgccaaggtcgaagaatacggtgatgaattcaaggccagtatg
ggtgcggaaggcgtgcgcgagctgctgaagagtatcgatatcgtgaccgaggtggaaacc
attcgtgccgatatggcaaagacgggttccgataccaagatcaagaagctggccaagcgc
ctgaaggtgatcgaagcattccagaaatccggtatcaaacctgaatggatggtgctggaa
gtgttgccagtattgccgccggaattgcgtcctctggtacctttggacggcggtcgtttt
gcgacatcggatctgaatgatttgtatcgccgtgtgattaaccgtaacaaccgtctgaag
cgtttgctagaactgaaagcgccagaaatcatcgtgcgtaatgaaaagcgcatgctgcag
gaagcggttgattcgttattggacaacggtcgtcgcggcaaggctatgaccggcgcgaac
aagcgtccgcttaaatccctggctgatatgatcaaaggcaagggcggtcgtttccgtcag
aacttgctgggcaagcgtgtcgattattcggggcgttccgttatcgttgtgggcccgcag
ttgcgcttgcatcagtgcggcttgcctaagaagatggcgcttgagctgttcaagccgttc
attttccacaagcttgaagtcatgggtctggcaacgacgatcaaagcagcgaagcgtatg
gtggaaacggaagagccggtggtctgggatattctggaagacgtcatccgtgaacatccg
gttatgctgaaccgtgcgccgaccctgcatcgcctgggtatccaggcgtttgagcctatc
ctgatcgaaggcaaggcgatccagttgcatcctcttgtttgtgcggcatttaacgccgac
ttcgacggcgaccagatggcagtgcacgtaccgttatcactggaagcgcaaatggaagcg
cggacgttgatgctggcatccaacaacgtgctgtcgccggcaaacggcgagccgattatt
gtgccgtcgcaggatattgtgcttggcttgtattacatgacccgcgaaaaagtgaacgca
gtgggcgaaggcatgatgtttgccgacgtggacgaagtgtcacgtgcttatgaatcgcgc
caagctgagctgaatgcaaaagtgactgtgcggatcaaggaagcttattacgacgagcag
ggcgaacgtgcggagaaattgacccgctacgaaaccactgtcggtcgtgcactgctgtcc
gagattctgcctatcggcttgtcgtttacccacgtcaacaagatattgaagaagaaagaa
atttccaagctgattaacgtgagcttccgtcgttgcggtttgcgcgaaacggttattctg
gcagacaagctgatgtacaccggtttcacgtacgctacccgcggcggtatgtcgatttgc
gtggacgacatgctggtgcctacacaaaaacacgacatcatcagcgcttccgagaaagaa
gtgcaggaaatcgaggcgcagtacacatcaggtctggttacacaaggcgagcgttataac
aaggttgttgacatctggggtcgcgcaggcgatcaggtagcgaaagcgatgatgacacag
cttggtagcgaacctgttgtcacgcgcgacggagtcgcaaccacgcaggaatcctttaac
gctatctatatgatggcggattccggcgcacggggttccgctgcccagattcgtcagctg
gcaggtatgcgtggtctgatggcaaaacctgacggttccatcattgaaacaccgatcact
gcgaatttccgcgaaggtttgaacgttctgcagtacttcatttcgactcacggtgcgcgt
aaaggcctggctgatacggcattgaaaacggctaactccggttatctgacccggcgtctg
gtcgacgtgacccaggatctggtagtgattgaagatgattgcggaacgcgtgaaggcctg
gtgctaaaagccctggtcgaaggtggtgaagttatcgagccgttgcgcgagcgcgtgttg
gggcgtgttactgcgctggatctgattcaccctgaaaccggcgaaaccgttattgaagca
ggcgtcatgcttgacgagaatatggtcgagaaaatcgaagcgctggatatcgatgaagtc
aaagtcagaactgccttgacctgtgacacccgctacggcttgtgcgcaaaatgctatgga
cgcgatttgggtcgcggctatctggttaatgtgggtgaggccgtcggtgtaatcgcagcg
caatccatcggtgagccgggtactcagctcaccatgcgcaccttccacatcggtggtgct
gcatcgcgttcggctgctgcaagtcagcttgaatcgaaatcagccggcgttgcaacctat
agtactgcgatgcgttatgtgaccagcgccaagggcgaagcgattgcgattgcgcgtagc
ggcgagattatcatcatcggtgacaacggtcgtgagcgtgagcggcacaaagtgccttac
ggcgctaccttgacggttaaggatggcgacaagatcaaggctggtcaggtgatggcgatg
tgggatccgcatacgcgccctatcatcaccgagtacgcaggtcgtgtccgcttcgagaac
gttgaagaaggtgctaccgttgccaaacaaatcgatgatgtgaccggtttgtcgactctg
gtggttatcgatccgaagcgtcgcgtgggtgccgcaagcaaaggcttgcggcctcaggtc
aagctgctggatgaaaacggcatggaaatcaaggttgcagccactcaaatgccggttaat
attactttccagatcggttccattatcacggtcaaggatggtcaggaagtgggtgtcggt
gaagtacttgcgcgtattccccaagagtcgtccaagactcgcgatattaccggcggtttg
ccgcgtgtggcggagttgttcgaggcgcgttcaccgaaagatgccggtgtgctggcacca
gtcacgggaacggtttcgttcggcaaggataccaaaggcaagcagcgcctggtgattacc
gacctggatggaatggcgcacgagtatctgattccaaaagagaaacacgtaactgcacac
gatggtcaggtagtgaataaaggtgaaatgatcgtggacggtccagtggatccgcacgat
atacttgcactgaaaggtgttgaggcgctgtcgcgatatattactgatgaagtccaagac
gtttaccgtttgcagggtgtgaagattaacgataagcacattgaggttatcgtacgccaa
atgcttcgccgtgttagtgtggtcgatgcaggcgataccaagttcatacaaggcgagcag
gtcgagcgtgcagagttgctgatcgaaaatgaacgagtgctggccgaagggaaagagccc
gcaacctttgattatgtgcttctcggtattaccaaagcttctctgtcgacggattcgttc
atatcggcggcatcattccaggagacgacgcgggtgttgacggaagctgcaatcatgggc
aagaaagacgaactgcgcggcttgaaagaaaacgtcattgttggtcggttaatcccggca
ggtacaggattggcttatcacaatacacgcaggatgcaaaaactgggtctcgatatggca
actgaatcggacatttttgaagcaccggaagcagtagatagtgagcagtctgcttga
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integrated database retrieval system
