Sulfuriferula sp. AH1: CAP31_12665
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Entry
CAP31_12665 CDS
T04857
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
sulf
Sulfuriferula sp. AH1
Brite
KEGG Orthology (KO) [BR:
sulf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sulf03009
]
CAP31_12665
Enzymes [BR:
sulf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CAP31_12665
Ribosome biogenesis [BR:
sulf03009
]
Prokaryotic type
rRNA helicases
CAP31_12665
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
P-loop_SecA
AAA_22
CMS1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ARU32456
LinkDB
All DBs
Position
complement(2515631..2517019)
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AA seq
462 aa
AA seq
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MNTTSFSSLSLSPAFLSNLDALGYREMTPIQAQSLPQILAGRDLIAQAKTGSGKTAAFGI
GILHKLNPSYFAIQALVLCPTRELADQVATSLRQLARFASNIKVLTLCGGSPMAPQVASL
EHGAHIVVGTPGRLLDHIGRGSIKLSTVQTLVLDEADRMVDMGFYDEITAIVRACPSRRQ
TLMFSATYPDDIRKASKLFLRDPVEVKVESLHAASHIEQRFYEVGYDERNAAVAKLLNHF
KPVSTLAFCNTKAQCNELAEELRAQGFSALALHGDLQQRERDEVLVLFANQSCSVLVATD
VAARGLDIQTLSAVINVDVTRDAEVHIHRIGRTGRGEAQGLVLNLATPNELKWVKLIENY
QGEPANWFNLAELAQAEGPPLQAPMVTLFMMGGKKDKLRPGDILGALTGEVGLVKEQVGK
INVFEFVTYVALDRRIVEQAFARLSAGNIKGRSFKMRLITLA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
gtgaacacaacatccttttccagcttgtcgttatctcccgcctttctcagtaatctcgat
gcgctgggttaccgcgaaatgacgccgatacaggcgcaaagcctgccgcagatactggca
gggcgcgatctgatcgcacaggccaagaccggcagcggcaagacggctgcgtttggtatc
ggcatcctgcacaagctgaatccgagctattttgcgatacaggcgctggtgctgtgcccg
acgcgggaactggcggatcaggtggcgacatcgctgcgccagctggcgcgctttgccagc
aatatcaaggtgctgaccttgtgcggcggctcgccgatggcgccacaggtagcttcgctg
gagcatggcgcgcatatcgtggtcggcacgcccgggcgtctgctcgatcatatcggccgc
ggcagcatcaagctgtcgacagtgcagaccctggtgctggatgaagccgaccgcatggtg
gacatgggtttctatgatgaaatcactgccatcgtgcgcgcttgcccgagccgccggcag
accctgatgttttcggcgacttatcccgacgatatacgcaaagccagcaagctgtttctg
cgcgatccggttgaagtcaaagtcgaatcgctgcatgccgccagtcacatcgagcagcgt
ttctacgaagtcggctacgatgaacgcaacgctgcggtagcgaagctgctcaatcacttc
aagcccgtatccacgctggccttctgcaacaccaaagcgcaatgcaacgagctggccgag
gaactgcgtgcgcagggattctccgcgctggcgctgcacggcgacctgcaacagcgcgag
cgcgacgaagtgctggtgctgttcgccaaccagagctgctcggtactcgtagcgacagac
gtagccgcacgcgggctggatatccagaccctgagcgcagttattaacgtcgatgtcacc
cgcgatgccgaagtacatatccaccgtatcggtcgtaccggacgcggcgaagcgcaaggt
ctggtgctgaatctggcaacgccgaacgagctcaagtgggtcaagttgatagaaaattat
caaggcgagccagccaactggttcaatctggcagaactcgcgcaggcagaaggcccgccg
ctacaggcgccgatggtcacgctgttcatgatgggcggcaagaaagacaaactgcgtccc
ggcgatatattgggcgcactgaccggggaagtcggattggtgaaagaacaagttggcaag
atcaacgtgtttgaattcgtcacctatgtcgcgctggacaggcgcatcgtcgaacaggct
ttcgccagactgagtgcggggaacatcaaggggcgcagcttcaagatgcggttgatcacg
ttggcgtga
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