Sulfurimonas lithotrophica: FJR48_08005
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Entry
FJR48_08005 CDS
T06298
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sulg
Sulfurimonas lithotrophica
Pathway
sulg03420
Nucleotide excision repair
sulg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sulg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FJR48_08005
03430 Mismatch repair
FJR48_08005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sulg03400
]
FJR48_08005
Enzymes [BR:
sulg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FJR48_08005
DNA repair and recombination proteins [BR:
sulg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FJR48_08005
MMR (mismatch excision repair)
Other MMR factors
FJR48_08005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
Viral_helicase1
AAA_30
AAA_12
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
QFR49678
UniProt:
A0A5P8P1R7
LinkDB
All DBs
Position
complement(1593300..1595390)
Genome browser
AA seq
696 aa
AA seq
DB search
MPLSRLNKEQYNAASSEDHQNLIIASAGTGKTSTIVGRIAHLLNSGVKPNEILLLTFTNK
AAAEMVSRVAEYFGKDVAGKIDAGTFHAVSYRWLKKFDKKVVLKQQRELKTLFRSVFEKR
TFMNIDAEVQPYGGNYLYDLYSFYQNTELTQDFENWIIDNYPEHELFALIYADVVDEFEK
LKQEYGFVNFNDLLLNFRDMCKTKELGYKEVLVDEYQDTNALQGTIIDAMNPPSLFCVGD
YDQSIYAFNGADITIIGSFNKKFPDAKVHTLTKNYRSSPLILSLASKVIEHNERIYPKQL
EVTRKGEFENPKLLAYDELFDQYHAIATKIRDSMTPHEDIAVIFRNNSTADGIEVGLREL
GIACKRKGGTSFFDAREVKAVLDLYTLLINESDMMAFIHVFEFARGIGSAMAKEMYLALK
NVGAGSIFHGLYAPDESMSNPFEKRKLNHQLGLFDDFLELGAVGKFAKLGFEAKFMKNPV
LKHPKLTKDSATFLHNFYVLFRALKGIKQPKTIVKKIYESELFRYISDVLSTKRATLKDS
TVDEKQKSESLTKIKRKMLLLEELSHPYDNHERFLNAMILGSSDLTQGEGVNLLSVHASK
GLEYKEVYVIDLMDGRFPNRKLMQRGGSLDEERRLFYVAVTRAKDILYLSYAKYDKIKKT
NFVASQFLYEAGLVAKDENYRALVQKELDKLDEDGA
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
ttgccgttatcacgtctaaataaagaacaatataatgcagcaagctctgaagatcatcaa
aacttaatcatagcatctgcagggacaggaaaaacatctactattgtcggaagaatcgca
caccttttaaactcgggtgtaaaaccaaacgagatattgcttttgacgtttacaaacaaa
gctgctgcagaaatggtctcacgtgtagccgaatattttggtaaagatgtcgcaggcaaa
attgatgcgggaacattccatgcagttagctacagatggcttaaaaagtttgataaaaaa
gtagttctaaaacagcaacgtgaattaaaaaccctatttaggagtgtttttgaaaaacgt
acatttatgaatatagatgcagaggttcagccatatggcggaaactacttgtatgatctt
tactctttttaccaaaatacggaactgactcaggattttgagaattggataatcgataat
tatccagaacatgaactttttgctttgatttatgcagacgtggtcgatgagtttgaaaaa
ctaaagcaggagtacggttttgtaaactttaatgacttacttttaaattttagagatatg
tgtaaaactaaagaactgggatataaagaggtgcttgtagatgagtatcaggatactaat
gcacttcaaggtactattatcgatgctatgaatccgccttcacttttttgtgtcggtgat
tatgaccagagtatctacgcttttaacggtgcggacattacgataatcggctcgtttaat
aaaaagtttccagatgcaaaggtgcatacacttactaaaaactatcgttcttctccgctt
attttatcccttgcatccaaggtaattgagcataatgaacgcatctatccaaaacagctt
gaagttactcgtaagggagagtttgaaaatccaaaacttttggcatatgatgaacttttt
gaccagtaccatgcaatagctacaaagatacgtgatagtatgactccccatgaagatata
gcggtaatatttagaaataattcaacggcagacggtatagaagtagggcttcgtgaactt
ggaatagcgtgtaaaagaaaaggcggtacaagcttttttgatgcacgagaagttaaagcc
gtactcgatttatatactcttttgataaacgagtcggatatgatggcatttatccatgtt
tttgaatttgctcggggcatcggaagcgctatggcaaaagagatgtatctagctttaaaa
aatgtcggggcagggagtatttttcacggtctttatgcacctgatgaatctatgagcaat
ccgtttgagaaaagaaaacttaaccatcaactgggactttttgatgactttttggaactt
ggtgcggtagggaaatttgcaaagcttggatttgaagcaaaatttatgaaaaatccagtg
cttaagcatccaaaacttacaaaggattccgctacttttttacataacttttatgttttg
tttcgtgctcttaaaggaatcaaacaacctaaaacgattgtaaaaaaaatatatgagagt
gaactttttaggtatatatccgatgtattaagtacaaaaagagctactttaaaagactca
accgtagatgaaaaacaaaagagtgaatcacttacaaaaataaaacgtaagatgctttta
ctagaagagttatctcacccatatgataatcatgaaagatttttaaatgctatgatttta
ggctcatcggacttaactcaaggcgaaggtgtaaaccttttaagtgtgcatgcatctaaa
gggctggaatataaagaagtttatgtgattgatttgatggacggacgttttccaaatcgt
aaacttatgcaacgtggcggaagtctggatgaagaacgcagacttttttacgtagcggtc
acacgtgcaaaagacatactttatctctcatatgcaaagtatgacaaaataaaaaagact
aactttgtagcgagtcagttcttatatgaagcaggtttagtagctaaagatgagaactat
agagccttggtacaaaaggagcttgataagctggatgaagatggtgcttag
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