Sulfurimonas lithotrophica: FJR48_09055
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Entry
FJR48_09055 CDS
T06298
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sulg
Sulfurimonas lithotrophica
Pathway
sulg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sulg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FJR48_09055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sulg03019
]
FJR48_09055
03016 Transfer RNA biogenesis [BR:
sulg03016
]
FJR48_09055
Enzymes [BR:
sulg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FJR48_09055
Messenger RNA biogenesis [BR:
sulg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FJR48_09055
Transfer RNA biogenesis [BR:
sulg03016
]
Prokaryotic type
tRNA degradation factors
FJR48_09055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
QFR49867
UniProt:
A0A5P8P2N8
LinkDB
All DBs
Position
complement(1800412..1802595)
Genome browser
AA seq
727 aa
AA seq
DB search
MKYDSKIELENKIEEYSFSDVARQANGSAWLKSGDTVILATVVIDETEVVKDDFLPLTVQ
YIEKTYAAGKLPGGFFKRETKPGDFETLTSRIVDRSLRPLFPKGFGHPTQITIMVFSVDK
ESDLQVLALNAASAALYVSDIDINTSVSAIRAAKIDGKLVLNPTLSQLKESTLDLYLSGT
KDDLLMIEMRTLGSEDVEMGDVIVDPMLDPAMGAVMLSKHTSNAMNEDELIEVFEKTQSV
LFESNKKYEQSFNSHKKETKPLECKAHNINEEMLEYVRNNHFADITTAMNQMAKSERSTA
LRELRKNIISAKTEWADVELELELKDAIERVKREQVRGQILNEKVRADGRTLNEVRPITI
DTNVLPSAHSSCLFTRGQTQALVVLTLGGVKDAQMFETLTEEGTQDENFMVHYNFPGFSV
GEASPVMGVKRRELGHGNLAKRALEPIVNIDGQTIRLVSEILESNGSSSMATVCGGYMAL
KAADIDVSDTVAGIAMGMVSEGDKYAILSDIMGLEDHDGDMDFKVTGSKEGITAMQMDIK
LGGISLDVLKEALYQAKEGRSHIIDIMLEAESKIEFNDGVLPSTDFFHIDPSFIGDIIGQ
AGKNIREIIEKFEVAIDIDKKEGKVKVTGKNKSGVKAAREHIEGITSKPKVQKIKYEVGD
KYPGVVKKIVDFGAFVELPDGTDGLLHISKISKDRVEKVSDVLKEGDEVTVEILEFKGNK
ISLGRVF
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
gtgaagtatgacagtaaaatagaattagaaaataaaatagaagagtatagtttcagtgac
gttgcccgtcaagcaaacggtagtgcatggttaaaaagcggtgataccgtgatattagct
actgtagttatagatgaaactgaagttgttaaagatgactttttgccattaaccgtgcag
tacattgaaaaaacatacgcagcgggtaaattaccgggtggattttttaaacgtgaaaca
aaacccggtgactttgaaacattaacttcacgcatcgtagatagaagtttgcgtccgctt
tttcctaaaggttttgggcatccgacacagataactataatggtgttttcggttgataaa
gagagtgatttgcaggtactggcattgaatgccgcatctgcagctttatatgtgagtgat
atagatataaatacatcagtcagtgctatacgtgcagctaaaatcgacggtaaattagta
ttaaatccgacactttcacagttaaaagagtcaacactggatttatatctctcaggaaca
aaagacgacttgctgatgattgagatgcgtacactgggaagtgaagatgtcgagatgggt
gatgttatagttgatcctatgcttgatcctgcaatgggtgcggtgatgttatctaaacac
acttctaatgcaatgaatgaagatgaacttatagaggtatttgaaaaaactcaatcggta
ctatttgaatcaaataaaaagtatgaacaaagttttaattcccataaaaaagaaacaaaa
cctttagagtgtaaagctcataatataaatgaagagatgcttgaatatgttagaaataac
cattttgcagatataacaactgctatgaatcagatggcaaaatctgaacgctcaacagcc
ttaagagaattaagaaaaaatataatatcagcaaaaacagagtgggctgatgttgagctg
gaacttgagttaaaagatgcaatagagagagtaaaaagagaacaagttaggggtcaaata
cttaacgaaaaagttcgtgcagacggaagaactttaaatgaagtaagaccaatcactata
gatacaaacgtacttccttcggctcattcatcttgtttgtttactcgtggtcaaacacaa
gctttagttgttttaacattgggcggtgttaaagatgctcagatgtttgaaacacttaca
gaggaaggtacgcaagatgaaaactttatggttcattacaactttcccggcttttccgta
ggtgaagcatcccctgtcatgggtgttaaacgtagagaacttggtcacggaaacttagct
aaaagagcactagagccgattgtaaatattgacgggcagaccatacgtttggtatctgaa
attttagaatcaaacggctcatcatctatggctacggtatgtggcggttatatggcacta
aaagctgctgacattgatgttagtgatacagtagcaggtatagctatgggtatggtaagt
gaaggtgataagtatgctattctttcagacattatgggtcttgaagatcatgatggagat
atggattttaaagtgacgggttcaaaagagggaatcactgctatgcagatggatataaaa
ctcggaggaataagtttagatgttctaaaagaagcactttatcaagcaaaagaggggaga
agtcatataatagatattatgcttgaagctgagagtaagatagaatttaacgacggtgta
ttaccatctactgactttttccatattgacccaagttttataggtgacatcataggtcag
gcaggtaaaaatatccgtgaaataattgagaagtttgaagtagctatcgatatcgataaa
aaagaaggaaaagttaaagtcacagggaaaaataaatccggtgtaaaagcggcgagagag
catattgaaggtattacatcaaagccaaaagtacagaaaattaaatatgaagtcggcgat
aagtatccgggagtcgttaaaaaaatagttgatttcggtgcatttgtagagctacctgac
ggcactgacggtcttttacacatctctaaaatatctaaagatagagttgaaaaagtttca
gacgttttaaaagagggtgatgaggtaactgtagagattttagaattcaaaggaaataaa
atctctttaggcagagtattttaa
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