Sulfurimonas lithotrophica: FJR48_11975
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Entry
FJR48_11975 CDS
T06298
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
sulg
Sulfurimonas lithotrophica
Pathway
sulg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sulg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FJR48_11975 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sulg03400
]
FJR48_11975 (uvrB)
DNA repair and recombination proteins [BR:
sulg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FJR48_11975 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FJR48_11975 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
Kinesin
SWI2_SNF2
T2SSE
AAA_22
UB2H
Microtub_bd
Selenoprotein_S
Motif
Other DBs
NCBI-ProteinID:
QFR50519
UniProt:
A0A5P8P4B3
LinkDB
All DBs
Position
unnamed:complement(12156..14138)
Genome browser
AA seq
660 aa
AA seq
DB search
MKKEALFKVESPYQPAGDQPQAIEKLSKSILDGNRYQTLEGVTGSGKTHTMARVIEKVQR
PTIIMTHNKTLAAQLYSEFRQFFPHNHVEYFVSYYDYYQPEAYIPRQDLFIEKDSAINDE
LERMRLSSTANLLSYDDVIVVASVSANYGLGDPEEYENMVQALEVGDEIEQKKLLLRLVE
MGYTRNDSYFDSGHIRVNGESLDVYPPYFEQEAIRIEFFGDEIEAIYTFDIIDNKKLEEH
KSFTIYATSQFSVRAEKMAIAIKRIEEELDERLDYFQKENKLVEYQRLKQRVEFDLEMLE
TTGSCKGVENYSRLLTNKKPGEAPYTLLDYFELHHKDYLVIVDESHVSLPQYRGMYAGDR
ARKEVLVEYGFRLPSALDNRPLKIDEYINKAPHYLFVSATPAEQELELSAVKAEQIIRPT
GLLDPVIEVKSSDNQVEDIHDEIKKVTAKNERVLITVLTKKMAEALTKYLADLGIKVQYM
HSDIDTIERNQIIRSLRLGEFDVLIGINLLREGLDLPEVSLVGILDADKEGFLRSETALI
QTIGRGARNANGRVILYANKITGSMQRAMGTTKHRREIQDAFNKEHGITPKTTIRALDES
LKLEDHGGIYQKNKKLDKMPASERKAIIKELSLKMKDAAKNLEFEEAARLRDEIAKIKKL
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagaagcattatttaaagtagaatcaccttatcaaccagcaggcgaccaacca
caagccatagagaaacttagtaaatctatactcgatggaaacagataccagacacttgag
ggtgtaaccggaagcggaaaaacacatactatggctcgtgttatagaaaaggtacaacgc
cctactatcataatgactcacaacaagactctggcagctcagctttactcggagtttcgt
cagttttttccacataatcatgttgaatattttgtctcatattatgattattatcagccc
gaagcttacatacctagacaagacctgttcattgaaaaagactctgctataaacgatgag
ttagagcgtatgaggctatcttctactgctaaccttttatcttatgatgacgttatcgtt
gttgcatcagtatctgcaaattacggtttaggtgaccccgaagagtatgaaaacatggtt
caggctttagaagtaggagatgagatagaacaaaaaaaacttctgcttcgtttagtcgaa
atgggttacactagaaacgactcttattttgacagcggacatatccgcgtaaacggtgag
agtttagacgtatatccaccatactttgaacaagaagcaatccgcatagagttttttggt
gacgagatagaggctatttatacctttgacattattgataataaaaaactcgaagaacat
aaaagctttactatctatgcaaccagccaatttagcgtaagggctgaaaagatggctatt
gcgataaagcgtatagaggaagagttagacgaaagattggattattttcaaaaagaaaat
aaactagttgaatatcaacgtcttaaacaacgcgtagagtttgacttggagatgctagag
actacgggaagctgtaaaggggttgaaaactactcacgtcttctaacaaacaaaaagccg
ggagaggctccatatactttgcttgactactttgaactgcatcataaagactatttggtt
atcgttgatgaatctcacgtttcacttcctcagtatcgcggtatgtatgcaggtgacagg
gctagaaaagaggtacttgtagagtatggatttcgtctgccctcagcacttgacaaccgt
cctttaaaaatagacgagtacataaacaaagccccacattatctttttgtctctgctaca
cctgcagaacaagagttagaactctccgctgttaaagctgaacaaataatacgccctaca
ggtttgcttgaccctgtcatagaagttaagagttcggacaaccaagtagaagatattcac
gatgagataaaaaaagtaactgctaaaaatgagcgtgtactcattaccgttttaacaaaa
aaaatggcagaagctcttacaaaataccttgcagatttgggcatcaaagtacaatatatg
cactctgatattgatactattgagcgtaatcaaatcattcgctcgcttcgccttggcgaa
tttgatgtattgatagggattaacctgcttcgtgaagggcttgatttacctgaagttagt
ttagtaggtatcctagatgcagataaagaaggttttttgagaagtgagactgcacttata
caaactatcggtcgtggtgcaagaaatgcaaacggtcgtgtaattttatatgcaaataaa
ataacaggttctatgcagagagctatgggtacgactaaacacagacgtgagattcaagat
gcttttaacaaagagcacggtataactccaaaaactactattcgtgctttggatgagagc
ttaaaacttgaagatcacggcggcatttaccaaaagaataaaaaactggataaaatgccg
gcatcagagagaaaagcaataatcaaagagctttcacttaaaatgaaagatgcggctaaa
aatcttgagtttgaagaagccgcacgtttaagagatgaaatagcaaaaattaaaaaacta
tag
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