Sulfurospirillum sp. hDNRA2: NL930_10745
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Entry
NL930_10745 CDS
T11541
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sulh Sulfurospirillum sp. hDNRA2
Pathway
sulh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sulh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NL930_10745 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sulh03021
]
NL930_10745 (rho)
03019 Messenger RNA biogenesis [BR:
sulh03019
]
NL930_10745 (rho)
Transcription machinery [BR:
sulh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NL930_10745 (rho)
Messenger RNA biogenesis [BR:
sulh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NL930_10745 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
Mor
AAA_25
Spore_III_AA
OB_RNB
OB_RNR_1st
Motif
Other DBs
NCBI-ProteinID:
XCN50555
LinkDB
All DBs
Position
2185229..2186635
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AA seq
468 aa
AA seq
DB search
MNDQTNNKEGTMSGTTPSQATTQPQPCANQAPTNGQAKPTYYNKSRTHVPVDGYKIESLR
TTPLEKLLEIATELGIENPNELKRQDLMFEILKSQVNQGGFILFTGILEIAGEGYGFLRA
MDANFSDSANDAYVSSTQVKKFALRTGDIVTGQVRPPKDQERYYALLKIEAINYLPMTES
KKRPLFENLTPLYPTEKIKLEYDPMKITGRVLDLFTPIGKGQRGLIVAPPRSGKTELMKE
LAHGIARNHPESELIVLLVDERPEEVTDMQRCVQGEVYSSTFDMPASNHVRVANLVIEKA
KRRVEMGKDVIILLDSITRLARAYNTVTPSSGKVLSGGVDANALHKPKRFFGAARNIEDG
GSLTIISTALIETGSRMDEVIFEEFKGTGNSEIVLDRNISDRRIYPAINIMKSGTRKEEL
LLSPDTLQKVWALRSAINQMDDVEALKFLYAKMLKTKDNEELLSIMNE
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcaaactaacaacaaagaaggcacaatgagcggaacgactccctcccaagcg
acgacgcaaccccaaccttgcgcaaatcaggcgccaaccaacggacaagcaaaaccgacg
tactataacaaatcacgcacccacgttcccgttgacggctataaaatcgaaagcttacga
accacgcctttagaaaaacttcttgaaattgctaccgaactgggcatcgaaaatcccaat
gaactcaaacgccaagatttgatgtttgagattttaaaatctcaagtcaaccaaggcgga
tttattctttttacgggtatcttagagatcgcaggcgagggatacggctttttgcgtgcg
atggacgccaacttttccgatagcgcaaacgacgcttacgtcagcagtacgcaagttaaa
aaatttgccctccgaacgggcgacatcgttaccggacaagtcagaccgcccaaagatcaa
gagcgttactacgcgcttttaaaaatcgaagcgatcaactatctcccgatgacggagagc
aaaaaacgtcctctttttgaaaacctcacaccgctttaccccaccgaaaaaatcaaactc
gaatatgatccgatgaaaattaccggacgcgtactcgatctttttacgccgatcggtaaa
ggtcagcgcggactcatcgtcgcacctcctagaagcggtaaaaccgaactgatgaaagag
ctcgcacacggtatcgcacgcaatcatcccgaatccgaactcatcgttttactcgtcgac
gagcgtcccgaagaggtcaccgatatgcaacgttgcgttcaaggcgaagtctatagctca
acgttcgatatgcccgcctccaatcacgtacgcgtcgccaacctcgtcatcgaaaaagcc
aaacgccgcgtcgagatgggtaaagacgttatcatcttgctggactcgatcaccagactt
gctcgcgcgtacaacaccgtcacgccttccagcggtaaagttttgagcggcggcgttgac
gccaatgcccttcacaaacccaaacgctttttcggtgcagctcgtaatatcgaagacggc
ggtagtttgaccattatctccaccgcgctgatcgaaacgggaagccgcatggacgaagtt
atctttgaagagttcaaaggtacgggtaacagcgagatcgttttagatcgcaatatttcc
gatcgtcgtatctatccggcgattaacattatgaaatcgggaacgcgtaaagaagagctt
cttttaagccccgacacgcttcaaaaagtatgggcgcttcgcagtgcgatcaaccaaatg
gacgacgtggaagccctcaaattcctttacgccaagatgctcaaaaccaaagacaacgaa
gagcttttatcgattatgaatgaataa
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