Sulfitobacter sp. JL08: C1J05_00020
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Entry
C1J05_00020 CDS
T05585
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
suli
Sulfitobacter sp. JL08
Brite
KEGG Orthology (KO) [BR:
suli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
suli03032
]
C1J05_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
suli03400
]
C1J05_00020 (gyrB)
Enzymes [BR:
suli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
C1J05_00020 (gyrB)
DNA replication proteins [BR:
suli03032
]
Prokaryotic type
DNA Topoisomerases
C1J05_00020 (gyrB)
DNA repair and recombination proteins [BR:
suli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C1J05_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AXI53099
LinkDB
All DBs
Position
4048..6465
Genome browser
AA seq
805 aa
AA seq
DB search
MSETEQVPEEYGADSIKVLKGLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDNGIDEALAG
HADAVNVVIHADSSVSVSDNGRGIPVGIHEEEGVSAAEVIMTQLHAGGKFDSNSYKVSGG
LHGVGVSVVNALSDWLELRIWRNGKEHYARFEGGFTTEHLKVVGECGDRTGTEVRFMAST
NTFSNLDYSFQTLEKRLRELAFLNSGVRIILTDERPAEPLRSELFYEGGVKEFVKYLDRH
KSSVMPEPIFITGERDDIGIEVAMWWNDSYHESVLPFTNNIPQRDGGTHMAGFRGALTRT
INNYAQSSGIAKKEKVSFTGDDAREGLTCVLSVKVPDPKFSSQTKDKLVSSEVRPAVEGL
VNEKLAEWFEENPNEAKIVVGKIVEAALAREAARKARDLTRRKTAMDVNFLAGKLKDCSE
KDPSKTEVFLVEGDSAGGSAQTGRDRQTQAILPLKGKILNVERARFDRMLGSQEIGNLVM
ALGTGIGRDEFDISKLRYHKIVIMTDADVDGAHIRTLLLTFFYRQMPELIERGHLYIAQP
PLYKVSRGKSEVYLKDQAAMEEYLINQGVEGAMLKQGNGEEISGQDLLRVVDMARQMRRV
LEAFPTHYPRHILEQAAIAGAFAPGVVDADLQGTADKVAERLNLIALEYEKGWQGRITQD
HGIRLARILRGVEEVRTLDGRIMRGGEAKRTGAFTQSLQDVYSLPAQLIRKDRSQMIYGP
MDLLDAILAEGEKGLSLQRYKGLGEMNPDQLWETTLDPDARTLLQVRVEDMAEADDLFTK
LMGDVVEPRREFIQQNALNVENLDF
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaaccgaacaggtgccagaagaatacggcgctgattccatcaaggttctcaaa
ggcttagaggcggtgcgcaagcgtcccggtatgtacatcggcgacaccgatgacgggtct
ggcctgcaccacatggtgtacgaagtcgtagacaatggcattgacgaggcgttggccggt
catgccgacgcggtgaacgttgtcattcacgcggattcaagcgtttccgtcagcgacaac
ggacgcggaatacccgtgggtatccacgaagaagaaggcgtgtctgctgccgaagtcatc
atgacccagcttcatgcagggggtaaattcgacagcaattcgtacaaggtttccggcggt
ctgcacggtgttggtgtgtccgtggtaaacgcattgtccgattggcttgaattgcgcatc
tggcgcaacggcaaggaacattatgcaaggttcgaaggcggctttacgactgaacacctg
aaagtcgtgggcgaatgtggcgaccgcacaggtaccgaagtgcgtttcatggcgtcgaca
aacaccttttcaaaccttgattattcatttcagacactggaaaaacggctgcgcgaactg
gcgttcctgaactccggtgtgcgtatcatcctgacggatgaacgccccgccgaaccgttg
cgctcggaactgttttacgaaggtggcgtcaaagagtttgtgaaatacctcgatcgtcac
aaaagctcggtcatgccggaaccgattttcattaccggcgaacgcgacgacatcgggatc
gaggtcgcgatgtggtggaatgacagttaccacgaaagtgttctgccgtttaccaacaac
attccgcaacgtgatggcggcacccatatggccggatttcgcggggcgctgacgcgcacg
atcaacaattatgcgcaaagttctggtatcgcgaagaaggaaaaagtcagctttaccggc
gacgatgcccgcgaaggtctgacctgcgtgctgtctgtcaaagtgcctgatccgaagttt
tcatcccagaccaaagacaaactggtcagttccgaagtgcgccccgctgtcgaagggttg
gtgaacgaaaaactggcggaatggttcgaggaaaacccgaacgaggccaaaatcgttgtt
ggcaagattgtcgaagcggcactggcgcgcgaagcggcgcgaaaggcacgggatctgacc
cgtcgtaaaacggcgatggatgtgaactttctggctggaaagcttaaggattgttcggaa
aaagacccgtccaaaactgaagtgttccttgtcgagggtgacagcgccggtggatctgcc
caaaccgggcgtgatcgtcagacccaggccattctgcccttgaaaggcaaaatcctgaac
gttgaacgggcgcggtttgaccgcatgcttgggtcacaggagatcggcaacctggtgatg
gcgctgggcacagggatcggacgcgatgaattcgatatctcgaaactgcgctatcataag
atcgtcatcatgacggacgcggacgtagacggcgcgcatatccgcaccctgttgctgaca
ttcttttacaggcaaatgccggaactgatcgaacgcggccatctctatattgcgcaacca
ccgctttacaaagtgtcacgcggcaaatccgaagtgtacctgaaggatcaggccgcgatg
gaagaatacctgatcaatcagggcgtcgaaggcgccatgctgaaacagggaaatggcgaa
gaaatttcggggcaggacctgttgcgcgtcgttgatatggcccgccagatgcgccgcgtg
cttgaagcgtttccaacgcattatccgcgccacatccttgaacaggcggccattgccggg
gcctttgcccccggtgttgtcgacgccgacctgcaaggcaccgcagacaaggtggccgag
cgtctgaacctgattgcgctggaatatgaaaagggctggcagggccgcataacccaggat
cacggcatccgtcttgcgcgcatcctgcgcggcgtggaagaggtgcgcacccttgatggc
cgcatcatgcgtggcggcgaggcaaagcgcaccggggcgttcacccaaagcctgcaggat
gtctattcgctgccggctcaattgatccgcaaagacagaagccagatgatttatggcccg
atggacttgctggatgccattctggccgaaggcgaaaaaggtctgtccctgcagcgttac
aagggactgggtgaaatgaaccctgatcagttgtgggaaaccacgcttgatccggacgct
cgcactttgttgcaggttcgcgtcgaagacatggccgaagctgatgatctgtttacaaaa
ctgatgggggatgtggttgaaccacgccgcgaattcattcagcaaaatgccctgaacgtc
gaaaacctggatttctag
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