Sulfitobacter sp. JL08: C1J05_00085
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Entry
C1J05_00085 CDS
T05585
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
suli
Sulfitobacter sp. JL08
Pathway
suli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
suli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1J05_00085 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
suli03019
]
C1J05_00085 (recQ)
03400 DNA repair and recombination proteins [BR:
suli03400
]
C1J05_00085 (recQ)
Enzymes [BR:
suli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1J05_00085 (recQ)
Messenger RNA biogenesis [BR:
suli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C1J05_00085 (recQ)
DNA repair and recombination proteins [BR:
suli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C1J05_00085 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
Rhodanese
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-ProteinID:
AXI53112
UniProt:
A0A345R6C5
LinkDB
All DBs
Position
17321..19366
Genome browser
AA seq
681 aa
AA seq
DB search
MTGAATLLQDVFGFDAFRPGQQDIVQAVTNGENVLAIMPTGGGKSLCFQLPALMRDGVTV
VISPLIALMRDQVRALQEAGVAAGALTSGNTEEETEAVWDALEQGSLKLLYMAPERLAAG
SAMGMLRRINVTMIAVDEAHCVSQWGHDFRPDYLRIGELRRALNVPLAAFTATADAETRQ
EIVEKLFDGVAPRAFLHGFDRPNIHLAFAPKNSPRRQILEFAAARKGQSGIVYCGTRAKT
EGLAGALREAGHAACHYHGGMEAEDRRIVERRFQQEDGLIVVATVAFGMGIDKPDIRWVA
HADLPKSIEGYYQEIGRAGRDGAPAQTLTLFGSDDIRLRRSQIDEGLAPPERRMADHARL
NALLGLAEALNCRRKTLLGYFGEDAAACGHCDLCDTPAEVFDGTTAVRKALSAILRTDER
FGAGHLIDILTGTRTDKIAARGHDDLPTFGVGGEYDKNGWQAVFRQMMGHDLVRPDPERH
GALRMTDKALPVLRDQATIELRRDTIRAAAGSRRPAIKTLVFEEDAPLLSALKARRRAFA
EAAKLPAYIVFNDRTLIEMAETRPATLDDMARISGVGAKKLERYGAAFLEVITGAREDVH
PTRRKLAGRPAGELYDRLLEVQAKLSRGSGGIEKPISCSASLLAKIAATRPQNAGALERL
LGERRAERFGDAFLDVLREAG
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgacaggcgctgccacgctgttgcaggatgtattcggctttgatgcctttcgacccggc
cagcaggacattgttcaagcggttacaaacggcgaaaacgtgctggccattatgccaacg
ggcgggggcaaatccctgtgtttccagcttcctgccctgatgcgagacggggttactgtt
gtaatctcgcctttgatcgccctgatgcgggatcaggtccgtgccttgcaagaggcgggc
gttgccgctggggctctgacctccggcaataccgaagaagaaaccgaagcggtttgggac
gcgttggaacagggcagtctgaaactgttgtacatggcgcccgagcggctggcggcgggc
agtgcgatgggcatgctgcgccgtatcaacgtgacgatgatcgcagtggacgaggcgcat
tgcgtcagccagtggggtcatgatttccgccccgattacctgcgtatcggcgaactgcgg
cgcgcgctgaatgtgccgctggcggcctttacggcaaccgcagatgccgaaacccgtcag
gaaatcgttgaaaagctttttgacggtgtcgcgccgcgcgcctttttgcacggttttgac
cgcccgaatattcatttggcattcgcccccaagaacagcccccgccgccagatcctggag
tttgccgccgcccgcaagggacaatccggcatcgtctattgcggcacccgcgccaagacc
gaaggtctggccggtgccctgcgcgaggcggggcatgccgcctgtcactatcatggcggt
atggaggccgaagaccgccgtatcgttgaacgcaggttccagcaggaagacgggttgatc
gttgtggccactgtggcgtttggcatgggcattgataaacccgatatccggtgggtcgcg
catgctgatctgccaaaatccattgaaggctattatcaggaaatcggtcgcgcggggcgt
gatggggcacccgcgcaaacgctgaccctgttcgggtcggatgatatccggctgcgccga
tcccagattgacgaaggtctggccccgccggaacggcgcatggccgatcatgcgagatta
aacgcgctgcttgggctggccgaagcgttgaactgccggcgcaagacattgctgggttat
ttcggcgaagacgccgccgcttgcgggcattgcgatctgtgcgatacgccggctgaagtg
tttgatggcacaacagccgtgcgcaaggcgctgtctgccatattgcgcaccgatgaaagg
tttggcgcaggacacctgatcgacatcctgacaggcaccagaacggacaagatcgcagcg
cgcgggcatgatgatctgccgacattcggggttggcggcgaatatgacaaaaacggctgg
caggcggtgttccggcagatgatgggccacgatcttgtacggcccgatcccgaacggcac
ggcgccctgcgcatgaccgacaaggcgctgccggtcttgcgggatcaagccacgatcgaa
ctgcgccgcgatacgatccgtgctgccgcgggcagccgccgcccggcaatcaaaaccctg
gtattcgaagaagatgcaccgcttctgtccgcgctcaaggcacgccgccgcgcctttgcc
gaagcggcaaaactgcccgcgtatatcgtgttcaatgacagaacccttattgaaatggca
gaaacccgccccgccacactggacgacatggcaaggatcagcggcgttggcgccaaaaag
ctggaacgctacggtgccgcctttctggaagtgatcacaggggcccgcgaagacgttcac
ccgacgcgccgcaaactggccggtcgccctgccggagagctttatgaccggttgcttgaa
gtgcaggccaaactgtcacgcgggtctggcggcatcgaaaaaccgatcagttgttccgca
tccctcttggcaaaaattgctgccacacgcccgcaaaacgccggcgcgctggagcggttg
ctgggcgaacgccgcgccgaacgttttggcgatgcctttctggacgtcctgcgcgaggcg
ggctag
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