KEGG   Sulfitobacter sp. JL08: C1J05_00135
Entry
C1J05_00135       CDS       T05585                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
suli  Sulfitobacter sp. JL08
Pathway
suli03030  DNA replication
suli03410  Base excision repair
suli03420  Nucleotide excision repair
suli03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:suli00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    C1J05_00135
   03410 Base excision repair
    C1J05_00135
   03420 Nucleotide excision repair
    C1J05_00135
   03440 Homologous recombination
    C1J05_00135
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:suli03032]
    C1J05_00135
   03400 DNA repair and recombination proteins [BR:suli03400]
    C1J05_00135
Enzymes [BR:suli01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     C1J05_00135
DNA replication proteins [BR:suli03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     C1J05_00135
DNA repair and recombination proteins [BR:suli03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     C1J05_00135
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C1J05_00135
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc Taq-exonuc DNA_polI_exo1 HHH_2
Other DBs
NCBI-ProteinID: AXI53121
UniProt: A0A345R6D4
LinkDB
Position
complement(31649..34447)
AA seq 932 aa
MSGSFGKGCHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVSGFCNMLQRYVDGNSGAD
APTHVAVIFDKGSHTFRNDLYDQYKANREAMPEDLRPQIPLTREATIAFNIACKELEGFE
ADDIIATLACQARDAGGRCTIISSDKDLMQLVGDGVEMLDAMKNRTIDVDGVIEKFGVKP
DRVVDVQALAGDSVDNVPGAPGIGIKTAALLINEFGDLDALLERAEEIPQPKRRQTLIDH
AEQIRLSRSLVQLDCDVALDFGLDDLEVKDPDPKKLLEFLAEMEFRTLSKRIAAKLDVEA
PEIPEIVNDTTQTQREAVPFDADKYECVRDMNALKLWLDRIDECGWVAVDTETTGLNEMR
ADLVGISLSVTPGEACYIPLIHKESASDDLFGSDKLAEGQLGLDQVLDALKPMLEDPAIL
KIGQNMKYDAKIFARNGVDVAPIDDTMLMSYALHAGEHNHGMDTLSERYLGHTPIPIKPL
LGSGKSAITFDKVPLDEATRYAAEDADITLRLWQHFKPQLHRKQVTTVYETLERPLVPVL
AQMEMSGIKVDRDTLSRMSNAFAQKMAGLEAEIHEMAGRTFNVGSPKQLGEILFDEMGIE
GGKKGKTGAYATGADVLEDLATEHELPARVLDWRQLSKLKSTYTDALQDHINPETGRVHT
SYSIAGANTGRLASTDPNLQNIPVRTEEGRRIREAFVADQGKVLISLDYSQIELRILAHI
ADIPALKQAFSDGLDIHAMTASEMFDVPIEDMTPEVRRRAKAINFGVIYGISGFGLARNL
RIPRAEAQGFIDRYFERFPGIRTYMDETKAFAKEHGYVQTLFGRKIHTPEINAKGPQAGF
AQRAAINAPIQGTAADVIRRAMIRMPDAIRNLPATMLLQVHDELLFEVDEDAVDDVIGVA
RDVMENASDPAVKLDVPLTVDAGRGANWAEAH
NT seq 2799 nt   +upstreamnt  +downstreamnt
atgtcgggatcgtttggaaagggatgccatctgcatctgattgatggatcggcgttcatt
ttcagggcctatcatgcgctgccgccgctgacgcgcaaatcggacgggctgccgatcggg
gcggtttccggcttttgcaacatgttgcagcgttatgtggacggcaactctggcgcggat
gcaccgacgcatgtggcggttatctttgacaagggatcgcacacgttccgcaatgatctt
tatgaccagtacaaggccaaccgcgaggcgatgccggaagacctgcgcccgcaaattccg
ctgacccgcgaggcaacgattgctttcaacatcgcgtgcaaggaactggaggggttcgag
gccgacgacattatcgccacgcttgcctgtcaggcccgcgatgcgggcgggcgctgtacc
atcatttcgtcggacaaggatctgatgcaactggtcggtgacggcgtcgagatgctggat
gcgatgaaaaaccggaccatcgatgtggacggtgtgatcgaaaagttcggcgtcaaaccg
gaccgcgtggtggatgtgcaggcgctggccggagacagcgttgacaatgtgcccggcgcg
cccggcatcgggatcaagacagccgccctgttgatcaacgaattcggtgatcttgacgcg
ttgctggaacgagcagaagaaatcccgcagcccaaacggcgccagacgctgattgatcat
gccgagcagatcagattgtcgcgcagtctggtacaactggattgtgacgtggcgctggat
ttcgggctggacgatctggaagtgaaggatccggaccctaaaaaactgctggaatttctg
gccgagatggagtttcgcacgctgtccaaacggattgcggccaaactggatgttgaagcc
cccgagataccggagattgtgaacgacacaacccagacccagcgcgaagccgttcccttt
gatgcggacaaatacgagtgcgtgcgcgatatgaacgccctgaagctgtggctggaccgg
atagacgaatgcggctgggtcgcagttgataccgaaaccaccggcctgaatgagatgcgc
gccgatctggttggaatatcgctgagtgtcacaccaggtgaggcctgctatattccgctg
atccacaaggaaagcgcatctgatgatctgttcggatccgacaaactggccgaagggcaa
ttggggctggatcaggttctagacgccctgaaaccgatgctggaggatcctgcgatcctg
aaaatcgggcagaatatgaaatatgatgccaagatctttgcccgcaacggcgtcgatgtg
gccccgattgatgacacgatgctgatgtcctatgcactgcacgcgggcgaacacaatcat
ggtatggacacgttgtcagagcggtatctgggccatacgcccattccgatcaaaccgctt
ctgggttccggcaaatccgcgatcacctttgacaaggtgccgcttgacgaggccacgcgc
tatgccgccgaggatgccgacatcacattgaggctttggcagcatttcaaaccacaactg
caccgcaagcaggtgacgacagtgtacgaaacactggaacgcccgctggtgccggttctg
gcgcaaatggaaatgtcgggcatcaaggttgaccgtgatacgctaagccggatgtcgaac
gcctttgcccagaaaatggcggggcttgaggccgagatacacgagatggccggcaggacg
ttcaacgtgggatcgcccaagcagctgggcgaaatcctgtttgacgaaatggggatcgaa
ggcggtaaaaagggcaagacaggggcctatgcaaccggcgcggatgttcttgaggatctg
gcgactgaacatgaactgcctgcccgcgtgctggactggcggcaattgagcaagctgaaa
tcgacctacacggatgccttgcaggatcatatcaatcccgaaactgggcgcgtgcacaca
tcctattccatcgcgggggccaataccgggcgtctggcatcaaccgatccgaacctgcaa
aacattccggtgcgtaccgaagaaggtcggcgtatccgcgaggcgtttgttgccgatcag
ggcaaggttctgatctcgcttgattacagccagatcgaactgcgtattctggcccatatc
gccgatattcccgctttgaaacaggcattttccgacgggctggacatccacgcgatgacc
gcgtcggaaatgtttgatgttccgatcgaagatatgacgcccgaagtacggcgccgtgcc
aaagcgatcaactttggcgtcatctacgggatttcaggctttggtctggcgcgcaacctg
cgcatcccgcgcgccgaggcgcaagggtttatcgaccggtatttcgaacggttccccggc
atccggacctatatggatgaaaccaaggcgttcgcgaaagaacatggttatgtgcaaact
ctgtttggccggaaaattcacacacccgagatcaatgcgaaaggtccgcaggcagggttt
gcccagcgcgccgccatcaacgcgcccattcaaggtacggccgcggatgtgatccggcgg
gcgatgatacggatgcctgacgccatcaggaacctgcccgcaacgatgctgttgcaggtc
catgatgaattgctgttcgaagtggacgaggacgccgtagacgacgtaatcggtgtggcc
cgcgatgttatggaaaatgccagtgatccggcggtgaagctggatgttcccctgacagtc
gatgcggggcgcggggcgaactgggccgaagcacactag

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