Sulfitobacter sp. JL08: C1J05_02450
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Entry
C1J05_02450 CDS
T05585
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
suli
Sulfitobacter sp. JL08
Pathway
suli03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
suli00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C1J05_02450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
suli03021
]
C1J05_02450
03400 DNA repair and recombination proteins [BR:
suli03400
]
C1J05_02450
Enzymes [BR:
suli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C1J05_02450
Transcription machinery [BR:
suli03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C1J05_02450
DNA repair and recombination proteins [BR:
suli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C1J05_02450
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Glyco_hydro_65C
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AXI56744
LinkDB
All DBs
Position
470039..471055
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AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPTQLDVKPGNDPARQATVVAEPLERGFGLTMGNALRRVLMSSLQGAAIT
SVQIDNVLHEFSSVAGVREDVTDIILNLKGVSLRMEVEGPKRLSISAKGPGVVTAGDISD
SSGIEILNRDHVICHLDDGADVFMELTVNTGKGYVAAEKNKPEDAPIGLIPIDAIYSPVK
KVSYDVQPTREGQVLDYDKLTMKVETDGSITPDDAVAFAARILQDQLGIFVNFDEPESAS
RQDDDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPDNIEDLAKKFEDAF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccataaaaattgggctgaattgatcaagccgacacaacttgatgtcaaacccggc
aacgatcctgcgcgtcaggcaaccgttgtggcagaaccgctggaacgcggctttggtctg
acgatgggcaacgcgttgcgccgcgttctcatgtcgtccctgcaaggggccgcgatcaca
tcggtgcagattgacaatgtgctgcacgagttttcaagtgttgccggtgtgcgtgaagac
gtgaccgacatcatcctgaacctcaaaggcgtgtccctgcgcatggaagttgaagggcca
aagcgtctttcgatttcggccaagggccccggtgttgtgactgcgggtgatatttccgac
agttccggcatcgaaatcctgaaccgcgatcatgtcatctgccacctggacgatggcgcc
gacgtgttcatggaactgaccgtgaataccggcaaaggctatgtcgcggcagaaaagaac
aaacccgaagacgcacccatcggtctgatcccgattgatgcgatctattcgccggtcaaa
aaagtcagctatgatgtgcaaccgacccgcgaaggtcaggttctggattatgacaagctg
accatgaaggttgaaaccgatgggtcgatcacgccggatgatgccgtggcctttgccgcg
cgcatcctgcaggatcagctgggcattttcgtcaacttcgacgaaccagaaagcgcgtcg
cgtcaggatgatgatgacggactggaattcaacccgctgctgctcaagaaagtggacgag
ttggaactgtctgtgcgttcggcaaactgcctcaagaacgacaacatcgtttacatcggc
gatctgatccagaaaaccgaagccgaaatgctgcgcaccccgaactttggccgcaaatcc
ttgaacgagatcaaggaagtgctgtcaggcatgggcctgcatctgggcatggacgtcgaa
gactggccacccgacaatatcgaggatctggccaagaaattcgaagacgcgttttaa
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