KEGG   Sulfitobacter sp. JL08: C1J05_13205
Entry
C1J05_13205       CDS       T05585                                 
Name
(GenBank) MBL fold hydrolase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
suli  Sulfitobacter sp. JL08
Pathway
suli03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:suli00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C1J05_13205
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:suli03019]
    C1J05_13205
Messenger RNA biogenesis [BR:suli03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     C1J05_13205
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 Lactamase_B_6
Other DBs
NCBI-ProteinID: AXI55329
LinkDB
Position
complement(2696283..2697953)
AA seq 556 aa
MSNERLIYLPLGGAGEIGMNAYVYGYGKPGKERLILVDLGVTFPDMDGTPGVDLILPDMT
WLKQNADRLDAIFITHAHEDHVGAVPHFYADLKAPIYARPFTANIARAKLEDNGHPAEAV
SVVSQWPQQTVAGPFSVGFLPISHSIPESSALVIDSPDGRVIHTGDFKLDKTPIVGEPFD
PELWAEVAKPGVKALVCDSTNVFSRHAGRSEVSVGPEIEALVSAANGMVVATTFASNVAR
VKTLAEAGDRAGRSIVLLGRAMKRMVEAAIETGVLTGFPRVVSPEDAKGIPRENLMLLVT
GSQGERRAASAQLARGTYQGFEMKDGDLFLFSSKTIPGNERGVIRIVNAYSEIGVDVVDE
SSGGHYHVSGHANRPDLETMHDLVKPQMLIPMHGEHRHLREHVKLAASKGLQGVVAVNGM
MIDLSGNAPTVAEYIETGRTYLDGTVQIGALDGVVRNRIRMALNGHVIVTVIIDDENEPL
GDAWCETMGLAEVGHSRAPLVDVLEEDLSQFLNRANEKTLSDDAKLEEALRRIVRQSTQN
EIGKKPEVTVVVSRLS
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgagcaatgaacgtttgatttaccttccccttggcggggcgggtgaaattggtatgaac
gcctatgtgtacggctatggaaaacctggcaaggaacgcctgattctggtcgatctgggt
gttacattccccgatatggatggcacgccgggggttgatctgatcctgcccgacatgacc
tggctgaaacagaatgccgaccggcttgatgcgatattcatcacccatgcccacgaggac
catgttggcgcggtgccgcatttctatgccgatctgaaagcgccgatatatgcgcgcccg
ttcacggccaatatcgcacgcgccaaactggaagataacggccatcctgccgaagctgtt
agtgttgtttcccaatggcctcagcaaaccgtggcggggcctttttctgtcggctttctg
ccaatctcgcattcgatccccgaatcttcagctcttgtgatcgacagcccggacgggcgg
gtgattcacaccggtgatttcaagctggataaaacacctattgtcggcgaaccgtttgat
cccgagctatgggccgaggtggccaaaccgggtgtcaaagcgttagtctgcgacagtaca
aacgtattttcgcgccatgctggccggtccgaagtgtcggttggccccgagatcgaagcg
ctggtcagtgcggccaatggcatggtggtcgccacgacatttgcatccaacgtggcccgt
gtcaaaacgctggccgaggcgggcgaccgtgccgggcgttcgatcgtgctgctggggcgg
gcgatgaaacgtatggtggaagcggccattgaaaccggtgtgctgacagggtttccccgt
gtcgtcagccccgaagatgccaaaggcattccgcgtgaaaacctgatgctgctggtaaca
ggcagccagggcgaacggcgcgccgccagcgcccagcttgcgcgcggaacctatcagggg
ttcgagatgaaagacggtgatctgttcctgttttcatccaaaaccattcccggcaacgaa
cgcggcgtcattcggattgtgaacgcgtattccgaaattggtgtggatgtggtggatgaa
agctcgggcgggcattaccacgtgtccggtcacgcaaatcgccccgatctcgaaacgatg
cacgatctggtcaagccgcagatgctgatcccgatgcacggggaacaccgccatttgcgc
gaacatgtcaaactggccgccagcaaggggctgcagggggtcgtggccgtgaacggtatg
atgatcgacctgagtggcaatgccccgacggtggcggaatacatcgaaacaggacgtacc
tatctggatgggacggttcagatcggcgcgctggacggggttgtgcgcaaccggatccgg
atggcgctgaacggccatgtgatcgtgacggtgatcatcgatgatgaaaacgaaccattg
ggcgatgcatggtgtgaaaccatggggttggcagaggttgggcacagccgtgcgccgctg
gtcgacgtgctggaagaagacctgagccagtttctgaatcgcgcgaatgaaaaaacgctg
tcggatgacgccaaactggaagaggcgttacgtcgtatagtgcgtcaaagcacgcagaac
gaaatcggcaaaaagccggaagtgaccgtggtggtcagcaggcttagttaa

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