Sulfitobacter sp. JL08: C1J05_13740
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Entry
C1J05_13740 CDS
T05585
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
suli
Sulfitobacter sp. JL08
Pathway
suli03420
Nucleotide excision repair
suli03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
suli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C1J05_13740
03430 Mismatch repair
C1J05_13740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
suli03400
]
C1J05_13740
Enzymes [BR:
suli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1J05_13740
DNA repair and recombination proteins [BR:
suli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C1J05_13740
MMR (mismatch excision repair)
Other MMR factors
C1J05_13740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AXI55428
LinkDB
All DBs
Position
complement(2807302..2809701)
Genome browser
AA seq
799 aa
AA seq
DB search
MSSFDEADAFESASLSARAMAARPQPYLEGLNPEQRAAVLALEGPVLMLAGAGTGKTKAL
TARIVHLLNTGTARPNEILAVTFTNKAAREMKNRVSGMLGQTVEGMPWLGTFHAICVKLL
RRHAELAGLKSNFTILDTDDQLRLVRQILDAEKVDRKKWTDRWFLLHIENYKNRAESAER
VGAGNGKRADRIPGAAADGTGFQRSVGDVYIQYQTRLRELNAVDFGDLLLHVVTIFQTHE
DVLKQYQRWFRYILVDEYQDTNVAQYMWLRLLAADHKNICCVGDDDQSIYGWRGAEVGNI
LRFEKDFPGAHVVRLEQNYRSTPHILGAASGVISGNKGRLVKELWTEAGEGEKVRLIGHW
DGEEEARWIGDEVEAMQRGTRGHAPVSLDDMAILVRASHQMRAFEDRFLTIGLPYRVIGG
PRFYERMEIRDAMAYFRVVTSPDDDLAFERIVNTPKRGLGDKAQQIIQVTARENGVSLVE
GARLAVDAGQIKGKGGSELVKLIDGLARWSRMADAPDISHIELAEIILDESGYTGHWQND
KTPEAPGRLENLKELVKALEQFENLQGFLEHVSLIMDNESEEGGAKVSIMTLHAAKGLEF
PAVFLPGWEDGLFPSQRSMDESGVKGLEEERRLAYVGITRAEELCTISFAANRRVYGQWQ
SSMPSRFIDELPQKHVEVLTPPGLYGGGYGAAGMAQEQPVHSSLAENAAQADGYNSPGWR
RLQARASQRPMSQPKETRNTVIDLQAVSSFMIGERVFHQKFGYGAIIGIEGDKLEVAFEK
AGTKKVVASFVSASDDIPF
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttttgacgaagccgacgcctttgagagcgcatccctgtccgcacgcgcgatg
gccgcgcgcccgcagccttatctggaggggctgaacccggaacaacgtgcggccgttctg
gcgcttgagggtccggtgctgatgctggcgggggcgggcaccggcaagaccaaggccctg
accgcacggattgtacatctgctgaacaccggcaccgcccgcccgaacgagattctggcc
gtgacctttaccaacaaggccgcgcgcgaaatgaagaaccgcgtttcgggcatgctggga
cagaccgtcgagggcatgccctggctgggaacgtttcatgcgatctgcgtgaaactgctg
cgtcggcatgcagaacttgcaggcctgaaaagcaatttcaccatactggacaccgacgac
caactgcgccttgttcgccagatactagacgcggagaaagttgatcgaaaaaaatggacg
gaccgttggtttctccttcacatcgaaaattacaaaaacagagcggagtcggccgaaaga
gttggcgcgggaaacggaaaacgcgccgatcgaattcccggtgccgcagcggatggtact
gggtttcaacgttcagtaggtgatgtgtatatccagtaccagacccgcctgcgcgagctg
aatgctgtggatttcggcgatctgctgctgcatgtcgtcacgatattccagacccacgaa
gacgttttgaaacagtaccagcgctggttccgctatattctggtggacgaatatcaggac
accaacgtggcgcagtatatgtggctgcgcctgctggcggcggatcacaagaacatctgc
tgcgtgggggatgacgatcagtcgatctatggttggcgcggggccgaggtgggcaatatc
ctgcggtttgaaaaggattttccgggcgcgcatgtggtgcggcttgagcagaactatcgc
agcaccccgcatattctgggtgctgcatcgggcgtgatttcgggcaacaagggccgtctg
gtaaaagagctttggacagaggccggagaaggcgaaaaagtacgcctgatcggccactgg
gatggcgaggaagaggcgcgctggattggtgacgaggtcgaggcgatgcaacgcggcacg
cgcggccatgcgccggtatcgctggatgatatggcgatccttgtgcgggccagccaccag
atgcgcgcctttgaagaccggtttctgaccatcggattgccctatcgcgtgatcggcggg
ccgcggttttacgagcggatggaaatccgcgatgcgatggcctatttccgggttgtcacc
agcccggacgacgatcttgctttcgagcggattgtgaatacccccaagcgcgggcttggc
gacaaggcccagcaaatcattcaggtaacggcgcgcgagaatggcgtgtctctggtcgag
ggcgcgcgtctggccgttgacgcggggcagatcaagggcaagggcggttccgagctcgtc
aaactgatcgacgggttggcgcgctggtcacggatggcggacgcgccggacatcagccat
atcgaactggccgagattattctggatgaaagcggctataccggccattggcagaacgac
aagacacccgaggctccggggcggctggaaaacctcaaggaactggtcaaggcgctggag
cagtttgaaaacctgcaagggtttctggaacatgtcagcctgatcatggacaatgaaagc
gaagagggcggtgcaaaagtcagcatcatgaccctgcatgccgccaaggggctggagttt
ccggccgtgttcctgccgggatgggaggatggtctgtttccctcgcaacggtcgatggat
gaaagcggtgtgaagggattggaggaagagcggcggctggcctatgtcgggataacccgt
gcagaagagctttgtaccatttcgtttgctgccaaccggcgggtatacgggcaatggcag
tcttctatgccgtcccgctttatcgatgaattgccgcaaaagcacgttgaagtgctgacc
ccgcctggattgtacggcggcgggtacggggcggcgggcatggcgcaggaacagccggta
cactccagtctggcagaaaacgcggcgcaggcggatggctataattcacccggatggcgg
cgtttgcaggcgcgggcatcacagcgcccgatgtcgcagcccaaggaaacccgcaacacg
gtgatcgaccttcaggcggtgtccagttttatgatcggcgaacgggtgttccaccagaaa
ttcggttatggcgccatcatcgggatcgaaggcgacaagcttgaggtcgcgtttgaaaag
gcgggcacgaaaaaggtcgttgccagctttgtgtcagctagcgacgacattccgttttaa
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